Nitrospira japonica: NSJP_0924
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Entry
NSJP_0924 CDS
T05001
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_0924 (dinB)
Enzymes [BR:
nja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSJP_0924 (dinB)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
NSJP_0924 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
HHH_5
RecR_HhH
DNA_pol_lambd_f
HHH
Cdd1
SAM_BAF
SelB_WH_2nd_bact
Motif
Other DBs
NCBI-ProteinID:
SLM47096
UniProt:
A0A1W1I252
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All DBs
Position
I:854993..856150
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AA seq
385 aa
AA seq
DB search
MGWPRQIFFGDVDAMFASAAIVKAPELAGKPVAVGGQAPRGIIAAASYAARAFGVRSAMP
TATAIRLCPELVLLQPDRPLYRQMHERMQGVTARLFPTVEWSSIDEFYVDTTDLHRVYPD
PASLGRTIKQAIFDETGLCCTVGASTGKVTAKIAADAAKPDGLLIIPPGSEAAFLADRPL
RALPGIGPKTGERLHTIGLRTIADLLDPRWETSLRPLFGQRLHWVRELAQGIDHDPVVPD
RESKSMSHETTFERDTGDPASLERVLRGFLTALARELRQESLAAGSVTVKLKDARFAVTT
KQRRFSRPLNYDPDMWPTVRMTLQDLMKPGALYRLAGLAVTSLTPAPSGLFDGRRSKAIE
AMDAIIARHGSGVMGLGGVSRTDDE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggatggccgcgtcagattttcttcggtgacgtggatgccatgttcgcctccgccgcg
atcgtcaaagcccccgagctggccggcaaacccgtggccgtcggcggacaggcgccccgg
ggcatcatcgccgccgcgagttatgccgcgcgggcattcggcgtccgctccgccatgccg
acggccacggcgatccgcctctgtcccgagctcgtgctactgcagcccgatcggccgctc
taccgccagatgcacgagcggatgcaaggcgtgaccgcccgcctctttcccaccgtggag
tggagcagcatcgacgagttttacgtcgacacgaccgaccttcaccgtgtgtatcccgac
cccgcgtcattgggccgcacaatcaagcaggccatattcgacgaaaccggtctctgctgc
acggtcggagcgtccacgggcaaggtgacggccaagatcgcggcggacgcggccaagccc
gacggtctgctgatcatccccccgggatcggaagcggcgttcctggccgatcggccgctt
cgggcactgccgggcatcggccccaagaccggcgagcggctgcacaccatcggcctgcgg
acgatcgccgacctgctcgatccgcgctgggagacgtcgctgcgcccgctcttcggccag
cggctccattgggtgcgggaactcgcgcaaggcatcgatcacgacccggtggtgccggac
cgcgaatccaaaagcatgagccatgaaaccacattcgagcgcgacaccggggacccggcc
tctctcgaacgggtgttgcggggtttcctgaccgcgcttgctcgagaactgcggcaagag
tccctggcggcgggttcggtgaccgtcaagctcaaggacgcgcgattcgccgtgacgacg
aagcagcgccgattttcccggccgctcaattacgaccccgacatgtggcccaccgtgaga
atgacgctgcaggacctcatgaagcccggagccctgtatcgactggccggattggccgtg
acctcgctgactcccgccccctccggactcttcgacgggcgacgcagcaaagccattgag
gcgatggacgccattatcgcccggcacgggtcgggcgtgatgggactcggcggcgtctcc
cggacggacgacgaataa
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