Nitrospira japonica: NSJP_1194
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Entry
NSJP_1194 CDS
T05001
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
nja
Nitrospira japonica
Pathway
nja03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NSJP_1194 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1194 (ku)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NSJP_1194 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
SLM47366
UniProt:
A0A1W1I2X4
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All DBs
Position
I:complement(1138758..1139711)
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AA seq
317 aa
AA seq
DB search
MPRTRRNRAGAHRPAHPDGTADHTDNEASASRVLWKGAISFGLVHIPVGLYSAENRSSFD
LTMLDRRSMHPVGFKRYNKDSGEDVPWNDIVKGYEYEKGRYVVLTDEDFRRANIEATQTV
EIVNFVPQEAISPLYFDTPYYLAPDKRGEKGYVLLRETLKQTGKVAIANVVIRTRQHVAA
LLPVGSVIVMNTLRYPNELRPSDELDIPSGNLKAVGVNAREIDMARRLVDEMSEDWKPET
YRDTYHGDLLALIEKRVQAGQTEAVEQPAVEEEQPSPKGEVIDLMALLKRSVETRGKSGK
PAGPSGSRGRKAGRSAA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcacccggcgtaacagagccggcgcccatcggcccgctcaccccgacggtacg
gccgatcacacggacaacgaggcctccgcatcccgtgtgctctggaagggcgccatcagt
ttcggactggtgcacattccggtcggcttgtattcggcggagaaccgcagcagcttcgac
ctcacgatgctggaccgtcgctccatgcacccggtcggcttcaagcggtacaacaaggac
tcgggcgaagatgtgccgtggaacgacatcgtgaagggctatgagtacgaaaagggccgt
tatgtcgtgctcaccgacgaagatttcaggagggccaacatcgaggccacccaaaccgtg
gagatcgtgaacttcgtcccgcaggaggcgatcagccccctgtattttgacacgccctac
tacctggcgccggacaagcgcggggagaaaggctacgtcttgctgcgcgaaaccctcaag
caaaccggaaaggtcgccatcgccaacgtcgtcattcgcacccgccagcatgtcgcggcg
cttctgccggtcggctccgtcatcgtcatgaacaccctccgatatcccaacgaattgcgg
ccttccgacgagttggacattccgtccggaaacctgaaggccgtcggggtcaatgcgagg
gaaatcgacatggcccggcggctggttgacgaaatgagcgaagactggaaacccgagaca
taccgggatacctaccacggcgacctgctggcgctgatcgaaaagcgtgtccaagcaggc
caaacggaagcggtcgaacagccggcggtcgaggaagaacaaccctcgcccaaaggtgag
gtcatcgacctgatggcgctgttgaagcggagcgtggaaactagaggaaaatccggtaaa
ccggcggggccgtccggaagccgcggacgaaaggcgggccgaagcgcagcttga
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