Nitrospira japonica: NSJP_1282
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Entry
NSJP_1282 CDS
T05001
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1282 (phrA)
Enzymes [BR:
nja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NSJP_1282 (phrA)
DNA repair and recombination proteins [BR:
nja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NSJP_1282 (phrA)
Prokaryotic type
NSJP_1282 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
SLM47454
UniProt:
A0A1W1I386
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All DBs
Position
I:1230980..1232425
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AA seq
481 aa
AA seq
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MRGVVWFRRDLRLADQPALTAACEECDEIIPLFVFDEPLLQSRAFGDACVNFMLGCLDDL
AERLASLGVPLRWRRGDPAVEVPSAVLEWKADAVYWNRDYEPAAIFRDRTVEVELMQRGV
QVRSFKDHVIFEADEVQSATGGPLQRYGAYRARWWTKWQAAKPAILPVPKTLSSRGAQCP
VSCPVIPSPDILGYDRVPVRIEPGERNAVKRLRRFVKGPLHRYAAGRNRPAIDGSSMLSP
HFRFGTLSARTAVRAALDSLTGSGPVSRADVVTWIDELIWREFFQQVLAAFPHVAEGPFR
ETSAPPARQPGQERDRLYRAWCEGRTGYPIVDAGMRQLNETGWMHNRVRMITASFMIKDL
RLDWRSGERYFMRQLIDADVAANNGNWQWCASTGTDAMRGYRIFNPALQSKKFDSDGVYI
RTYVPELDRVSSAHIHEPHLMTLEAQRRAGCRIGYDYPAPIVDHGQARREYLDLAKRRVA
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggagtcgtctggttcagacgggatctccgcctcgcggatcagccggcgttgacc
gctgcgtgcgaagagtgcgacgagatcattcccctctttgtgttcgacgaaccgcttctg
caatcccgggccttcggcgacgcctgcgtaaactttatgctcgggtgcctggatgacctg
gcggagcgtctggcctccttgggggtaccgctgcgatggcggcggggagatccggcggtt
gaggtgccgtctgccgtgctggagtggaaggctgacgccgtgtactggaaccgcgattat
gaacccgcggcaattttccgggaccggaccgttgaggtcgaattgatgcagcgaggcgta
caggttcgctctttcaaagaccacgtaatttttgaggcggacgaagtccaaagcgccacc
ggggggcctctgcagcgctacggcgcatatcgggcgcgctggtggacgaagtggcaggcg
gcgaaaccggccatcctacccgttccgaaaacgctctcctcgaggggagcgcagtgtccc
gtttcctgccccgttattccgtctccggacatcctcgggtacgatcgcgtgccggtccgg
atcgagcccggcgaacgaaacgccgtcaagcgattgcgacggttcgtcaaagggccgctt
caccggtatgcggccgggcgcaaccggccggcaatcgatggaagttcgatgctgtcgcct
cattttcggttcggaaccctctcggcgcgcacggctgtccgggcggcgcttgattccctg
accggtagcgggcctgtctcacgcgcggacgttgtcacgtggatcgacgagctgatctgg
cgcgaattcttccagcaagtccttgccgccttcccgcatgtggctgagggaccgtttcgc
gaaacttcagctcctccggctcgccagccgggtcaggaacgggaccggctctatcgggcc
tggtgcgaaggacgaaccggctatccgatcgtggacgccggcatgcgccagctcaatgaa
accggctggatgcacaatcgggtgcgcatgatcaccgcgtcattcatgatcaaggatctg
cgactggactggcggagcggagaacgatacttcatgcggcagctgatcgatgccgatgtc
gcggcgaacaacggcaattggcaatggtgtgcctcgaccgggacggacgcgatgcgcgga
taccggattttcaatcccgcgcttcagagcaagaaattcgattccgacggcgtctacatc
cgaacgtacgtcccggaactcgacagggtgtcttccgcgcatatccacgagccgcatctc
atgactctcgaagcgcagcggcgtgccggctgccgtatcgggtacgactacccggctcca
attgtggaccatgggcaagcgcggcgggagtatctggatctggccaaacgacgggtagcg
caatga
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