Nitrospira japonica: NSJP_1355
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Entry
NSJP_1355 CDS
T05001
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nja03009
]
NSJP_1355 (rimO)
Enzymes [BR:
nja01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NSJP_1355 (rimO)
Ribosome biogenesis [BR:
nja03009
]
Prokaryotic type
ribosomal protein modification factors
NSJP_1355 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
SLM47527
UniProt:
A0A1W1I3E1
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All DBs
Position
I:1311810..1313216
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AA seq
468 aa
AA seq
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MTVRLIKPDSPSRKRSSPVSDRKTTIGFVNLGCSKNQVDSEIMLGTLVQDGFELTADPKK
AEVVIVNTCGFIEEAKQESIDTILEQSKLKTSGRCRVLIAAGCLAQRYQGDLLKELPELD
GVVGTGEFGRIAEICRDLLAPRKRHRRLWLSKPPYLYDELAPRLRLGTAHSAYVKIAEGC
NRNCAFCAIPLMRGKQRSRPVESIVAEAHRLASEGVKEINLISQDTVNYGVDLGIRHGLA
ALLRELVKVKDLVWIRPFYLYPQQVTDELLDLYAGEERIANYIDMPLQHITDRMLNRMHR
LGDRAAIERLVERIRRRIPGVTFRTAFIVGFPGETEADFEALKHYVERAEFDRVAAFLYS
DEEDTPAVSLDDKIERAIMEERRNELLAIQESIAAAKGREQIGTVMEVLVDGPSEETEHL
LQGRHQGLAPEIDGVVYINDGIAAPGDRVKVEISDSGVYDLVGHVVDD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcgcctgatcaagccggattccccttcacggaagcggtcgtcccccgtctcc
gatcgcaagacgacgatcggattcgtcaatttgggctgctccaagaaccaggtggattcg
gagatcatgctggggacgctcgtgcaggacggattcgagttgaccgccgatccgaagaag
gccgaagtggtcatcgtcaacacgtgcggttttatcgaagaagccaaacaggaatcgatc
gacaccatcctcgaacaaagcaaattaaagacctcgggacgctgccgggtcctgatcgcg
gccggatgccttgcgcaacgctatcaaggcgatctgttgaaggagctgccggaactggac
ggcgtagtggggacgggagagttcgggcggattgccgagatttgccgcgatctcctggcc
cccaggaagcggcaccggcggctatggctcagcaagcccccctacctatacgacgaattg
gccccgcggctgcggcttggtaccgcccacagtgcttacgtcaaaatcgcggaaggttgc
aaccgcaactgcgccttctgcgcgattccgctgatgaggggaaagcaacggagccggccg
gtggaatccatcgtggccgaagcgcatcgtcttgcctccgaaggcgtgaaggagatcaat
ttgatctcccaggacaccgtcaattacggggtggaccttggaatccgccacggactcgcg
gcgctcctgcgtgaattggtgaaggtgaaggatctggtctggatcagacccttctatctc
tatccgcagcaagtgaccgatgaattgctcgacctgtatgccggggaagaacgaatcgcg
aactatatcgatatgccgttgcaacacatcaccgatcgtatgctgaaccggatgcaccgg
ctgggggatcgcgcggccattgaacggttggtggagcgtatcagacgacggattcccggc
gtgacctttcgaacggcgttcatcgtcgggtttcccggtgaaaccgaggcggactttgag
gcgttgaaacactatgtggagcgcgcggagttcgatcgggtggcggcgttcctctactcg
gacgaggaggatacgcctgcggtctcgctggacgacaaaatcgagcgggcgatcatggaa
gaacgccgcaacgaactgctggccattcaggaatccatcgccgcagcgaaaggccgagaa
caaatcggtacggtcatggaggtattggtcgacggaccttcggaagagacggaacatctg
ctccagggccgacaccagggattggccccggaaatcgacggggtcgtgtacatcaatgac
ggaatcgccgcaccgggcgacagggtcaaagtcgagattagcgattcgggcgtctacgat
ctcgtcggacacgtcgttgacgattga
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