Nitrospira japonica: NSJP_1457
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Entry
NSJP_1457 CDS
T05001
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nja03032
]
NSJP_1457 (hupB)
03036 Chromosome and associated proteins [BR:
nja03036
]
NSJP_1457 (hupB)
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1457 (hupB)
DNA replication proteins [BR:
nja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NSJP_1457 (hupB)
Chromosome and associated proteins [BR:
nja03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NSJP_1457 (hupB)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NSJP_1457 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
SLM47629
UniProt:
A0A1W1I431
LinkDB
All DBs
Position
I:complement(1400629..1400901)
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AA seq
90 aa
AA seq
DB search
MTKEELIAKMAASAGITKVAAGNALQAFTGAVTSSLKKGQRVSLVNFGTFTISRRKARLG
RNPRTGETLRIPAAKVPKFSAGKVLKSAVR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagagttgatcgcaaaaatggcggcctccgccggaattacgaaggtggcg
gcaggaaatgcgctccaggcctttaccggagcagtcacgtcctccctaaagaaggggcag
cgcgtgtccctggtgaatttcggaacctttaccatctcgcgccgaaaggcgcggcttggt
cgtaacccgcgaactggcgaaacgcttcggatcccggccgcaaaggtgccgaagttttcc
gcaggaaaggtgttgaagtcggcggtccgctaa
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