Nitrospira japonica: NSJP_1482
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Entry
NSJP_1482 CDS
T05001
Symbol
ihfB
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nja03032
]
NSJP_1482 (ihfB)
03036 Chromosome and associated proteins [BR:
nja03036
]
NSJP_1482 (ihfB)
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1482 (ihfB)
DNA replication proteins [BR:
nja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NSJP_1482 (ihfB)
Chromosome and associated proteins [BR:
nja03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NSJP_1482 (ihfB)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NSJP_1482 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DUF2267
PWI
Motif
Other DBs
NCBI-ProteinID:
SLM47654
UniProt:
A0A1W1I3T0
LinkDB
All DBs
Position
I:1425005..1425283
Genome browser
AA seq
92 aa
AA seq
DB search
MTKAQIIERVSEQVTTLTKRQAEIVVNTIFDCVRDSLKNGDKTEIRGFGSFRLRARRMKE
GRNPKTGATVAVPAKKVPFFKAGKELKELLNQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcccagatcattgaacgagtctccgaacaggtgacgaccttgacgaagcgg
caagccgaaatcgtcgtcaataccatcttcgactgtgtgcgggactcgctgaaaaacggc
gacaagacggaaattcgagggttcgggagctttcgcctcagggctcgccgcatgaaagaa
ggccgcaacccgaagacgggagccacggtggctgtgcctgccaagaaagtcccgttcttc
aaggccggcaaggaactgaaagaactcctcaatcagtag
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