Nitrospira japonica: NSJP_1497 Help Entry NSJP_1497         CDS       T05001                                  Symbol rpoD Name (GenBank) RNA polymerase sigma factor   KO K03086   RNA polymerase primary sigma factor Organism nja  Nitrospira japonica Pathway nja02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:nja00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     NSJP_1497 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nja03021]     NSJP_1497 (rpoD) Transcription machinery [BR:nja03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      NSJP_1497 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 Sigma70_r4_2 Vps54_N Motif Other DBs NCBI-ProteinID:  SLM47669 UniProt:  A0A1W1I471 LinkDB All DBs Position I:complement(1434374..1435630) Genome browser AA seq 418 aa AA seqDB search MKDKLFPVEEAEKNTPVEKDTDADNPEASDLLDMIGRDSAGERTSRDAAQPSRRQAATDG PFMLESLYFQSFGERALLTREEETALAKRIDQGTASIRTTLRSIIKVLSHARRSDAVIEA CQTLQLVRRLSGLSATALDKAELCLAALIRNSSGQAKFPAGVVRQLKQSLGIIREARSVL ETAKDELVRCNLRLVVDVAKHYTRRGLTLLDLVQEGNIGLMKAAERYQYRKGFKFSTYAT WWIRQGITRALADQSRTIRIPVHQTEASHRIMRVTRRLGQQLGRPAKLEEIAQVLRMRPE RLHETVQAFQEPIALEHPVGDGTTELGELLPDVHAVPPDAHVHRTEMANQLDRILNTLTP REQTVIRLRFGIGYDQPSTLEQVGQNLSVTRERIRQIEAKALKKLKTPAIKEMFASIQ NT seq 1257 nt NT seq  +upstreamnt  +downstreamnt atgaaggacaaattgttccccgtcgaagaagccgaaaagaacacaccggtcgagaaggat accgacgcagataatccggaagccagtgatctcctcgatatgatcggccgcgactcggcc ggtgaacggacatctcgtgatgccgcgcaaccgtccaggcgccaggcggcgaccgatgga ccttttatgctggagtcgctgtactttcaatcgttcggcgagcgggcgttgttgacgagg gaagaggaaaccgcgttagctaaacgcatcgatcaaggaaccgcatctattcgaaccacc ctccgttcaatcattaaggtcctgtcgcatgcaagacgttcggatgcggtaatagaggcc tgccagacgttgcaactggtgcgtcgtttgagcggtctgtcggccacggcgttagacaaa gccgaattgtgcttggcggcattaatcagaaattcctccggacaagccaaatttccggcc ggagtcgtacggcaactcaagcagtcgctcggaatcatccgtgaagccagaagtgtgttg gaaacggccaaagacgaattggtgcgatgcaatcttcgtctggtcgtggatgtggcgaaa cattacacacgtagagggctgacgttgcttgaccttgtgcaggaaggcaacatcggcctg atgaaggccgccgagcgttaccaatatcgaaaaggcttcaagttcagtacctacgcaacg tggtggatccggcaaggcattacgcgtgcgctggccgatcagtctcggacgatccggatt cccgtgcaccagactgaagcatcgcaccgcatcatgcgggtgaccagacgtctcggccag cagctgggtcgcccggccaaactggaagagatcgcgcaagtgctccgaatgaggccggag cggcttcatgaaaccgttcaggcgtttcaggaaccgatcgcgctcgaacatcctgtgggg gacgggacgaccgaattgggcgagctgctaccggatgtacacgcagtaccgccagatgcg cacgtccatcggacggaaatggcgaatcaactggaccggattctaaacaccctgacaccg agagagcagaccgtcatccggctgcgtttcggcatcgggtatgatcaaccatcgaccctt gagcaggtgggtcagaatctttcggtcaccagagagcgaatccgacagatcgaagccaag gcgcttaagaagttgaaaactccggccatcaaggagatgtttgcatcgattcagtag

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