Nitrospira japonica: NSJP_1569
Help
Entry
NSJP_1569 CDS
T05001
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nja03016
]
NSJP_1569 (truD)
Enzymes [BR:
nja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NSJP_1569 (truD)
Transfer RNA biogenesis [BR:
nja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSJP_1569 (truD)
Prokaryotic type
NSJP_1569 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
SLM47741
UniProt:
A0A1W1I464
LinkDB
All DBs
Position
I:1490920..1491948
Genome browser
AA seq
342 aa
AA seq
DB search
MSHPYLTAALPGIGGRIRVVPEDFQVEEMPLYLPCGEGEHLYIKVAKRLLSTPDLIRRLS
SVLGVKVQGIGSAGLKDARAVTTQMLSLHGVTAERAAGIKIDEQVLSVEILGRHRNRLRP
GHHAGNRFRLVIRDLEDHAHRTVPLVLQILQERGVPNYFGPQRQGRRGDNYQVGAELLAD
EARRRKMSRAKRMWYLNSLQSHLFNQILARRVDRLDRVFAGDWAMKTENGACFPVENAEQ
EQPRADRFEISPTGILFGSRVSWADGEPGIIEREVVSENGATPEGLTEAAKACGFRGERR
PLRAKLDQVEWALDGNVLTLGFPLPPGAYATNVLRELMKTPE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagccatccctatctcaccgccgcacttcccgggatcggcggacgcatcagggtcgtc
ccggaggattttcaggtggaagagatgcctttgtatcttccctgcggggaaggcgagcat
ctctatatcaaggtcgccaagcgattactgtccacgccggatctgattcgtcgactctcg
tcggtcttgggcgtcaaggtgcaaggcattggatccgccggtctcaaggatgcacgggcc
gtcacgactcaaatgctgtctctgcatggcgtcaccgcggaacgcgcggccgggatcaag
atcgacgaacaggtgttgtcagtggagattctgggccggcaccgcaaccggctgcgcccc
ggacatcatgcggggaaccgattccgactggtgattcgggatctggaagaccacgcgcat
cggacggtgccgctggtgttgcagatactccaggagcggggggtgcccaattatttcggt
ccgcagcggcagggcaggcgcggagacaattatcaggttggggccgaactcttggcggac
gaggccaggcgccgaaagatgagccgcgccaagcgcatgtggtatctgaacagtctccag
tctcacctgttcaatcaaattctggcccggcgggtcgatcggttggaccgggtgttcgcc
ggcgattgggcaatgaaaacggagaacggggcgtgttttccggtcgaaaacgccgagcag
gagcagccacgggcggatcgattcgagatcagtccgacggggattctgttcggctcgcgt
gtgtcctgggcggatggggagccgggaataattgagcgggaagtggtcagcgaaaacggc
gcgacaccggagggtctcacggaagccgccaaggcctgcggatttcgaggcgaacgtcgg
ccgttgcgcgcgaaattggatcaggtcgagtgggctttggacggcaacgtgttgaccttg
ggttttccccttcccccgggcgcgtacgcgaccaatgtgctccgggagctcatgaagact
cccgagtaa
DBGET
integrated database retrieval system
