Nitrospira japonica: NSJP_1611
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Entry
NSJP_1611 CDS
T05001
Symbol
aubR
Name
(GenBank) Transcriptional regulator
KO
K20334
LuxR family transcriptional regulator, quorum-sensing system regulator CviR
Organism
nja
Nitrospira japonica
Pathway
nja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NSJP_1611 (aubR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nja03000
]
NSJP_1611 (aubR)
Transcription factors [BR:
nja03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NSJP_1611 (aubR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
HTH_23
HTH_11
HTH_28
Sigma70_r4
MerR
HTH_40
Phage_p2_ORF12
Motif
Other DBs
NCBI-ProteinID:
SLM47783
UniProt:
A0A1W1I4N6
LinkDB
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Position
I:complement(1533476..1534291)
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AA seq
271 aa
AA seq
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MAEASKYPFPGQVFTALSRLECEHSLEVLHYAAQAETSEDIKGVLELIQTHFPFSRLLGG
LARLGSGGRFEGFANVVNVSYPDEWLRLYWQNSFFEVDPVFQKALKAPGTQLWKDTYRSA
TSKKEKEFIRTAEEFGLQSGITTGSADQACSIATFCSFAGESDLEAERYLPLMEYLGYHL
HLALMRTEPRHTYALDRCVKKLSVRELTILNWMKNGKTNWEIAQILGVTERTIRFHVESI
FSKLDVTSRSQAVATAIEHGLPNLHGLPSAV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcctcaaaatatcccttcccgggtcaggtcttcacggcgctctccaggttg
gagtgcgaacactcgctcgaagtcctccattacgcggcccaggcggaaacgtccgaggac
atcaaaggcgtattggagctgatccaaacccatttcccctttagccgattactcggaggt
ttggccagactcggatccggcggacgattcgaagggttcgccaacgtcgtcaatgtgagt
tacccggacgagtggttgcggctgtactggcaaaacagtttcttcgaagttgacccggtc
tttcagaaagcgctgaaagcacccgggacccagttgtggaaggatacctaccgctccgcc
acttccaagaaggaaaaagagttcattcgaaccgcggaagagttcggtcttcaaagcggc
atcaccaccggatcggccgaccaagcctgcagcatcgcgacgttctgctcatttgccggc
gagagcgacctcgaagccgaacgctaccttcccctgatggaatacctcggttaccacctg
catctcgcgctcatgaggacggaaccccgtcacacctatgcgctggatcgctgcgtaaaa
aaactctccgtccgcgagttgaccatcctgaactggatgaagaacggcaagacgaactgg
gagatcgctcaaattctcggcgtcaccgagcgcaccatccggttccacgtggagagtatt
ttctccaaactcgacgtcacctcccgctctcaggccgtggcaacggccatcgaacacggc
ctgccgaacctgcacggccttcccagcgcggtctaa
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