Nitrospira japonica: NSJP_1614
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Entry
NSJP_1614 CDS
T05001
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase 1
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nja
Nitrospira japonica
Pathway
nja00300
Lysine biosynthesis
nja00470
D-Amino acid metabolism
nja01100
Metabolic pathways
nja01110
Biosynthesis of secondary metabolites
nja01120
Microbial metabolism in diverse environments
nja01230
Biosynthesis of amino acids
Module
nja_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSJP_1614 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSJP_1614 (dapF)
Enzymes [BR:
nja01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NSJP_1614 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
SLM47786
UniProt:
A0A1W1I453
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Position
I:complement(1537786..1538670)
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AA seq
294 aa
AA seq
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MKNGFFRGHGLGNDYLVMDPKELTFSLTPASIKRICDRNWGLGSDGILAIVPTKRADFGL
RIFNPDGSEAEKSGNGLRIFSRYLHATGRTKKTRFTVDTKGGLVSIALHLDRHGDAASAT
VEMGRATFDPAALPCTLRVDELLREPIDAAGRSLRFTGVSVGNPHCVVLKPSGESWSRED
LLALGPALENHAIFPKRTNVQLAVPTGPAELFILIWERGAGETQASGSSSCAAASAAVRL
GLVRSPVTVKMPGGALTIEVAQDFSLTMKGPVAEVARGTLSASFLRELRAKRGK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacggattttttcgggggcacgggctggggaacgattacctcgtcatggacccc
aaggagttgaccttctccctgacgcctgcttcgatcaaacggatatgcgaccgtaactgg
ggactcggcagcgacggaattttggccatcgttccgacgaagcgggccgatttcggtctt
cgcattttcaatcccgacggcagcgaagcggaaaaatcgggcaacggcctccgcattttc
tcccgctacctccacgcgaccgggcggacgaaaaaaacccggttcacggtggacacgaag
ggtgggctcgtgagcatcgccttgcatctcgaccgccacggggacgccgcgtccgccacc
gtcgagatggggcgggccacgttcgatcccgctgcgcttccctgtacgctgcgcgtcgac
gaattactccgggaaccgatcgatgcggccgggcgttcgcttcgattcacgggagtcagc
gtcggcaatccccattgcgtcgtcctcaaaccctcaggcgaatcctggtcacgcgaagac
ctccttgcgctggggccggcgctggagaatcatgcgatctttcccaagcggaccaacgtg
caactggccgttcccaccggccccgccgaactcttcatcctgatttgggagcggggcgcg
ggagaaacgcaagcgtccggttcctcatcctgcgcggcggcttccgccgcagtcagactc
gggctcgtgcgctctccggtgacggtcaagatgccgggcggcgcgctcacgatcgaggtc
gcgcaggacttcagcctcaccatgaagggcccggtggccgaagtggccagaggcacactc
agtgcctcgttcctgcgggagcttcgcgccaagcgcgggaagtga
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