Nitrospira japonica: NSJP_1673
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Entry
NSJP_1673 CDS
T05001
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
nja
Nitrospira japonica
Pathway
nja00541
Biosynthesis of various nucleotide sugars
nja01100
Metabolic pathways
nja01250
Biosynthesis of nucleotide sugars
Module
nja_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NSJP_1673 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nja01005
]
NSJP_1673 (hldD)
Enzymes [BR:
nja01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NSJP_1673 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
nja01005
]
Core region
NSJP_1673 (hldD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
SLM47845
UniProt:
A0A1W1I4D9
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All DBs
Position
I:1598318..1599397
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AA seq
359 aa
AA seq
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MSSNGKTDLCLDGSRVLVTGWAGFIGSALIWGLNLRGCDDIVVVDRLRRSDKWRHLAPLR
FRDYLEADELLPRLQAGTLGQFDLVVHLGACSSTSESDVAYLIHNNFEFTKTLCHWTLNA
KGRFVYASSAATYGDGQQGMSDMDRDLDKLRPLNAYGFSKQLFDRYAWRNGLLDRIVGLK
YFNVFGPNEDHKGDMRSVVNKATQQAQATGRVELFKSYRPEYRDGQQKRDFLYVKDAVDM
TLHLAEKSQTAGLFNIGSGVAHSWLELTAAVFKALERKPAIDFIDMPTDLRPKYQYFTQA
AIEKLRATGYTRPITPLHDAVQDYVVNYLMPGALLDSGVGLTLSKPQKSDSPVGSFQHP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaatggtaagaccgatttgtgcttggacggcagccgagtgctcgtgaccggc
tgggcaggcttcatcggaagcgcgctaatctggggattgaatctgcggggctgcgacgac
atcgtcgtcgtcgatcgtctccgtcggagcgacaagtggcgccacctggctccgttgcga
tttcgcgactatctggaggccgacgagctattgcccaggctgcaagccggcacactggga
caattcgaccttgtcgtgcacctcggtgcctgttcgtcgaccagtgagagtgatgtggcc
tatctcatccacaacaattttgagttcaccaaaacgctgtgccattggacgttgaacgcc
aagggaagatttgtctatgcgtcttccgccgctacatatggcgacggacaacagggaatg
agcgatatggatcgtgacctcgacaaacttcgcccgctgaatgcctatggcttctccaaa
cagctgttcgatcgatacgcctggagaaacgggcttcttgatcgaatagtgggactcaaa
tacttcaacgtcttcggccccaacgaggaccataagggagatatgcgcagcgttgtcaat
aaggccacgcagcaagcgcaggcgacgggtcgagttgaattattcaagagttatcgcccg
gaatatcgcgacggtcagcaaaagcgagactttttatatgtgaaggatgcagtggatatg
acgttgcaccttgccgaaaaatcccaaacggccggcctgtttaatatcggttcgggagtc
gcccattcgtggctcgaattgaccgcagccgtctttaaggcattggagaggaagcctgcc
atcgactttatcgacatgcccaccgacttgcggccgaagtatcaatattttacccaggcc
gctatcgaaaagctgcgcgcgacggggtatacccgtcccatcacaccgcttcatgatgcc
gtacaggattatgtcgtcaactatttgatgccaggggctctcttggactctggtgtcggg
ctaacgctctcgaagccacagaagagtgacagtccggtcggttctttccagcatccatga
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