Nitrospira japonica: NSJP_1798
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Entry
NSJP_1798 CDS
T05001
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase and DNA-(Apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nja
Nitrospira japonica
Pathway
nja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NSJP_1798 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1798 (mutM)
Enzymes [BR:
nja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NSJP_1798 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NSJP_1798 (mutM)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NSJP_1798 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
zf-FPG_IleRS
DUF7573
PAS_11
Motif
Other DBs
NCBI-ProteinID:
SLM47970
UniProt:
A0A1W1I4P8
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All DBs
Position
I:1708624..1709508
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AA seq
294 aa
AA seq
DB search
MPELPEAEVVARQIRSRLTGARLIDAVLGRRDIVREGVGTLSWYRKTRLVSVERYGKSVA
LRFEKGTEARYVVAELGMTGLLLFDAVPIRHPRHVHAELIFEGSAERALRYWNPRRFGRL
SLLDASGLDRYISRRFGYDPLTVSREEFAGLLSHRRGRLKSLLMHQQTVAGIGNIYANEI
LFRAGLHPNALPNRLRPDRIDRLFRITREVLTQAIDCGGSSVRDFFAPDGTEGMYKRHHL
VYGKEGEPCPNRCGETIRRLQSERSSFICVSCQGRRGPARAFRTNEEAASIKHH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccctgaagcggaagtcgtcgccagacagatccggtctcgtttgaccggt
gcgagactgatcgatgcggtgctcggccgccgcgacatcgtgagggaaggggtgggcacc
ctgtcctggtaccgaaaaacgcgtctcgtttccgtcgaacggtacggcaagagtgtagcg
ctgaggtttgagaaaggcaccgaggcgcgatacgtggtggccgagctcggcatgaccggc
ctcctattgttcgacgctgttccgatcagacatccgcggcatgtccacgcagagttgatc
ttcgaaggaagcgccgagcgggcccttcgctattggaatccccgccgcttcggccgcctg
tcactcctcgatgcgtccgggctggaccgctatatctcccgccgtttcggctacgatcca
ttgacggtttcgcgcgaggagtttgccggtctcctgagccatcggcgaggccgtctaaaa
tcgttgttgatgcatcagcagacagtggccgggattggcaatatctatgcgaacgagatt
ttgttccgtgccggtctccatccgaatgccctgcccaatcgtctgcggcctgacagaatc
gatcggctcttccggattacccgggaagtgctcacgcaggcgatcgactgtggcggatcg
agcgttcgggattttttcgctccggacggcacggaaggcatgtacaaacgacaccatctg
gtctatgggaaagagggagagccttgtcccaaccgttgcggggagactattcggcgactc
cagagcgagcgaagctcgttcatctgtgtcagctgccaggggcggcgaggtccagcaagg
gcattccgcacgaacgaagaggcggcttccataaaacaccattaa
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