Nitrospira japonica: NSJP_2023
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Entry
NSJP_2023 CDS
T05001
Name
(GenBank) putative Amidase enhancer protein LytB
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nja01011
]
NSJP_2023
Enzymes [BR:
nja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NSJP_2023
Peptidoglycan biosynthesis and degradation proteins [BR:
nja01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NSJP_2023
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
SLM48195
UniProt:
A0A1W1I5E1
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All DBs
Position
I:1916831..1918066
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AA seq
411 aa
AA seq
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MDVSTVISICRWGMAVVVGVLVTLGTAPLQAAQSLRVLLAADVVKLDVQSNSSVWVSDSS
RHGKAVRPAVRIVPAGKGFMVNGVRMMHEQLTLQGEQGLTLTFVKADGTAGTNGRGAIKA
ATIQRVTVPVSGLVHVVRRGVGALVINQVDLEEYVKGVVPAEVNSSWHPEMLKAQAVAAR
TYALYQQMLSANRDYDVVASVQDQVYRGKQGVDGAVLKAVEETRGLVLTYQGAPIYAAFS
STAAGLTEDAVNVWSKDYPYLKGVECPFDLASPYYQWTASFRKELLEHNLRQQGFPIGMI
TALTPSSFSRGGRVATLRVAHTEGELILRGEELRKAVGYMVVPSTQFTVESVGSEIVLSG
YGAGHAVGMCQWGAKELAELGYPFSTILSYYYPDTQLQDMALTKAPIPPSS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcgacggtgatctcgatttgccgatggggcatggcggttgtcgtgggggtg
ctcgtgaccctcgggacggcaccgctgcaggctgcgcaatccttgcgggttctccttgcc
gcggacgtggtgaaactcgatgtccagtcgaatagctcggtttgggtatccgattccagc
cgccacggaaaggcggtccggccagccgttcgaatcgtgccggccggaaaagggtttatg
gtcaatggcgttcggatgatgcacgagcaactgaccctgcaaggggagcagggattgact
ctcacctttgtcaaggctgatggaactgcgggtacgaatggccggggagcgatcaaggcg
gcaacgatccagcgtgtaacggtcccggtcagcggccttgtccatgtcgttcgtcgaggc
gtgggcgcattggtgatcaatcaggtcgacttggaagaatatgtcaaaggcgtcgttcca
gcggaggtgaactcgtcctggcacccggaaatgttgaaagcccaggcggtggccgccagg
acctatgcgctttaccagcagatgctcagcgcgaaccgggactacgatgttgtggccagc
gtgcaggaccaggtgtatcgtggcaaacagggtgtcgatggggccgtattgaaggctgtc
gaagaaacgcgagggctcgtactcacataccagggggcgccgatctacgcggccttttcc
tcgaccgccgccggtttgacggaagacgcggtcaatgtgtggtcgaaggactatccctat
ctcaagggggtcgaatgcccgtttgacctggcatctccctactaccaatggacggcttcg
tttcggaaggaattgcttgagcacaaccttcgccaacagggatttccgatcgggatgatc
accgcgctgactccttcgtcgtttagtcgaggtgggcgggtggccacattgcgcgttgcc
catacggaaggagagctcatattacgtggcgaagagctgcggaaagcggtcgggtacatg
gtggtgccgagcacgcagtttaccgtcgaatccgtgggatctgagattgtgctgtctggt
tacggagcgggtcacgccgtcggcatgtgtcagtggggtgccaaagagttggccgaattg
ggctatcctttctctaccatcctgagctattactaccccgatacgcaattgcaggatatg
gcgctgacgaaggcgccgatccctccctcttcctga
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