Nitrospira japonica: NSJP_2030
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Entry
NSJP_2030 CDS
T05001
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nja
Nitrospira japonica
Pathway
nja00550
Peptidoglycan biosynthesis
nja01100
Metabolic pathways
nja01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NSJP_2030 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NSJP_2030 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nja01011
]
NSJP_2030 (mrdA)
Enzymes [BR:
nja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NSJP_2030 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nja01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NSJP_2030 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
tRNA_Me_trans_M
Motif
Other DBs
NCBI-ProteinID:
SLM48202
UniProt:
A0A1W1I5C2
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All DBs
Position
I:1923070..1924950
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AA seq
626 aa
AA seq
DB search
MTRQAMAISGGFDSDLGELQRRLVLLRIGLLLVVALLALRLWHLQIREGPYYRDLSENNR
TRSVILEPARGLIYDRNGVLLANNVPSFSLYVSLEDVKDREALINQLTQLIGLDPALVKK
KLAVRGAKQLPRKVKDRLTLKEATLIESHRLDLPGVMIQVESQRNYPSGMTAAHVLGYVG
EVSAEQLEKPEFAELHQGSIVGQYGVEKYFDRIMRGMAGQKSVEVDALGHEKRTVVVDQP
KAGDDLYLTIDARLQKVAEDLLGQESGAIVALDPTSGDILAMASRPAFDPNVLSRELTPK
QWVEIVQDEGRPLNNRASQGQYPPGSTFKVMMAAAALETNTVTPSSTVHCNGGYQFGRRL
YRDWKAGGHGSVDLHQALVHSCDVYFYTIGQRMGIDTIAAYGHQFGLGEETGVDLPSERV
GIMPSTAWKQKAKNEAWLPGETISASIGQGYVTVTPLQMASLIGTVANGGVAYRPRLVQA
IMSRDTGHLQELPSVEKHRLKVRQENLKLIRAALADVVTEGTATRAKSSIVSIAGKTGTA
QTSALRTGPEKDIPKKLRDHAWFVAFAPVDAPKIAVAVLAENMGHGGSAAAPLAKEVIES
FVKLTQHAPEAGHATAPKAHSGGSGL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacaggccatggcgatctccggaggattcgattctgatttgggcgagttgcag
cggcgcctggtgcttctccgcatcgggttgctgctcgtcgtggctctgctggcattgcga
ctgtggcatctgcagatccgcgaaggcccctattaccgcgatctttccgagaacaaccgg
acacgttcggtgatcctggaaccggctcgcggtctgatctacgatcgaaacggcgtgctg
ttggccaataacgttccgagttttagtctgtatgtgtccttggaggacgtcaaagatcgc
gaggccctgatcaatcaattgacgcaactcatcggccttgatcctgccctcgtcaaaaaa
aagctcgccgtgcgtggtgccaaacagctgccgagaaaggtcaaagatcgtttgactttg
aaagaggcgacgctcatcgaatcccaccggctggatctcccgggagtcatgattcaagtg
gagtcgcagcgcaactatcccagcggcatgacggccgcacatgtcttgggctatgtcggc
gaggtgtcggcggagcagttggagaagcctgaatttgccgagcttcatcaagggagtatc
gtcggccaatacggcgtggaaaaatacttcgatcgtatcatgcggggaatggcaggtcag
aaaagcgtggaggtggatgcgctggggcacgagaaacgaacggtagtggtcgatcaaccg
aaggccggcgatgatctctatctgaccattgatgccagattgcagaaagtcgccgaagat
ctgctgggacaagaatccggcgccatcgtcgcgctcgatccgaccagcggagacattctt
gccatggccagccgcccggcattcgatcccaacgtactgtctcgggaactgacacccaag
caatgggtggagatcgtccaagacgaaggcaggcctctgaacaaccgggcgtctcaaggc
cagtatcctcccggatccacgttcaaggtcatgatggccgcggcggctctggaaaccaat
acggtcactccgtccagcaccgttcattgtaacggcggataccagttcggccggcgcctg
tatcgtgactggaaagccgggggacatggctcagtcgacctgcatcaggcgctcgtccat
tcctgcgacgtatacttctacaccatcggccagcgcatggggatcgacacgatcgccgcc
tacgggcaccagttcggtctgggcgaagaaacaggcgtggatttgccctccgaacgggtg
gggatcatgccgtcgacggcgtggaagcaaaaggcgaagaacgaggcgtggctgccaggc
gagaccatttccgcctcgatcgggcaaggctatgtgacggtgacgccgcttcagatggcc
agtttgatcggtacggtcgccaacggtggagtggcctatcgcccacggttggttcaagcg
atcatgagtcgggataccggtcatcttcaggaactgccttccgtcgagaaacatcgattg
aaggtcagacaggagaacttgaaattgattcgggcggcattggccgatgtcgtgacggag
gggacggcgacaagggccaagtcttccatcgtgtccattgcggggaagaccggcacggcg
cagacatcggcgctgcgaaccggtccggaaaaagatattcccaaaaagctccgcgatcat
gcatggtttgtcgcatttgctcccgtggatgcgccgaagatcgccgttgccgtattggcc
gaaaacatggggcacggagggtctgccgcggccccgctggccaaagaagtcattgaatct
tttgtcaagctcacgcaacatgcgcccgaggccggacatgcgacggctcccaaggctcat
tccggcggatcggggttgtga
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