Nitrospira japonica: NSJP_2034
Help
Entry
NSJP_2034 CDS
T05001
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nja03032
]
NSJP_2034 (topA)
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_2034 (topA)
Enzymes [BR:
nja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NSJP_2034 (topA)
DNA replication proteins [BR:
nja03032
]
Prokaryotic type
DNA Topoisomerases
NSJP_2034 (topA)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NSJP_2034 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_RPB9
CK_II_beta
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
SLM48206
UniProt:
A0A1W1I5D1
LinkDB
All DBs
Position
I:1929014..1931353
Genome browser
AA seq
779 aa
AA seq
DB search
MAKSLIIVESPTKAKTITKYLGRGYTVIASVGHVKDLPTSKLGVDLERDFAPQYVTIKGK
SKVLAEIKKKAEEADKVFLAPDPDREGEAIAWHLAEELNGKSKKKKDGKVFRVLFNEITE
SAIKRALQSPGQIDMKLVNAQQARRVLDRIVGYQGSQLLWNKVRRGLSMGRVQSVAVRLI
CEREAEREAFRTEEYWSITALLAGTIPPPFEARLHSINGEEASIGTAEQAQRMVSALEGK
TFTVTSVERKEKKRNPVAPFITSRLQQEAARKLRFTSKKTMTLAQQLYEGIEIGTEGATG
LITYMRTDSPRISQEAMADVRQVIMERFGQEYLPGTPNVYKTQKAAQEAHEAIRPTSASR
DPESIKQYLEEDQYHLYKLIWNRFIASQMVPAILDVTRVESSPLNTPDRYLFRSSGTVVK
FPGHTIVYMEGVDKELFSQKPKQDEETEDGAERQLPVLAEGERLRLVEQPEQTIAGITSK
QHFTQPPPRYNEALLIKELEEKGIGRPSTYAAIISTIQDRKYVEKIEGRFIPTETGRTVN
DFLMKGFPDIVNVDFTSQLEEELDEVEEGNKPWIDAVRDFYNPFTADLEKAKSIPGPKDT
VEPPTNIPCEKCGRMMEIKWGRNGKFLACPGYKDDPPCKNTQNFEKLPDGTIKIVPKQEL
TTDQICDKCGSPMVVKTGRFGKFIACSAYPACKTTKPLALGVKCPQPECGGDLVQKRTRK
GRSFYACSRYPQCEFALWDRPVNKACPTCSAPFLIEKVSKQDGRSVQCRNEDCGYREAG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtctctcatcatcgtcgagtctccgacgaaggccaagacgatcacgaagtat
ttggggcgaggatataccgtcatcgcttccgtcggccatgtcaaggatcttcccaccagc
aagcttggcgtagaccttgagcgcgattttgctccgcagtatgtcacaatcaaagggaag
tcgaaggtgcttgctgagatcaagaagaaagccgaagaggccgataaagtgtttctcgct
cctgaccctgatcgcgagggagaggcgatcgcctggcacctggcggaggagttgaacggc
aaatcgaaaaagaagaaggacgggaaagtctttcgtgtcctcttcaatgagattacggaa
tcagccatcaagcgggcgctgcaatctcccggacagattgatatgaagttggtcaatgcg
cagcaggcgcgaagggtcctggatcgaatcgtcggatatcagggaagtcagttgttatgg
aacaaagtgcggcgcgggctgtccatgggacgggtacagtcggttgccgttcggctgata
tgtgagcgcgaggctgagcgcgaagcgtttcgcacggaggagtattggtcgatcacggcg
ttgttggccggaacgatacccccgccgtttgaagcccgactgcacagcatcaacggagaa
gaagcgtcgattggcacggccgagcaggcgcagcggatggtatcggcgcttgaggggaag
acgtttacggtcacgtccgtcgagcggaaggaaaagaagcggaacccagtggcgccgttc
attacgagtcgcttgcagcaggaagcggccagaaaactgcgatttacctcaaaaaagacg
atgacactcgcgcagcagctatacgaagggattgagatcggaacggaaggggcaaccggc
ctcatcacgtatatgagaacggattcaccgagaatatcccaagaggccatggctgacgtg
cgacaggtcatcatggagcgattcggccaggaatatcttcctggaactccaaacgtatat
aagacacaaaaggccgcacaggaggcgcatgaagccatcaggccgacatccgcatcccga
gatcccgaatcgatcaagcaataccttgaagaagaccagtaccatctctacaaattgatc
tggaaccggttcattgcttcccagatggtgccggctatcctggatgtaacgcgagtggag
tcctctccgctcaatacaccggatcgctatctgttccgctcgagtggaacggtcgtcaag
tttccgggccacacgattgtctacatggagggagtcgataaagaactgttctcccaaaag
cccaagcaagacgaagaaaccgaggacggagccgagcgacagttgccggttcttgccgaa
ggtgagcgccttcggttggtcgaacagccggagcagacgatcgcgggcattacgtccaaa
caacactttactcagccgccccctcgttacaacgaggctcttctcatcaaagaactggaa
gaaaaaggcattggaaggccgtccacgtatgcggccatcatttccaccatccaggaccgg
aagtacgtcgaaaaaatcgagggcaggttcattcctacggaaaccggtcgtacggtaaac
gattttttgatgaaggggtttcccgacatcgtcaatgttgatttcacctcccaactcgaa
gaggaactcgacgaggtcgaggaggggaacaagccatggatcgatgcggtgcgggatttc
tacaatcccttcacggcggacttggaaaaagcgaagtcgattcccggtccaaaggacacc
gttgaacctcccacgaatatcccctgcgaaaagtgcggaaggatgatggagatcaagtgg
gggcgaaacgggaagtttctcgcgtgccctggctacaaagacgatccgccctgcaagaat
acgcagaactttgagaaactccctgacggaaccatcaagattgttcctaaacaagagctc
acgaccgatcagatttgcgacaagtgcggaagcccgatggtcgtgaaaacgggacggttc
ggtaagttcatcgcatgctcggcctatcccgcctgcaagacgaccaagccgctcgcactc
ggcgtgaaatgtcctcagcctgaatgtggcggagaccttgtccagaaacgcacccgcaag
gggcgttcgttctacgcatgcagtcgctatcctcaatgtgaattcgctctctgggatcgt
cccgtcaataaagcctgcccaacctgcagcgccccgttcctgatcgagaaggtcagcaaa
caggacgggaggagcgtccagtgccgcaatgaagattgcggctatcgcgaagccgggtaa
DBGET
integrated database retrieval system
