Nitrospira japonica: NSJP_2080
Help
Entry
NSJP_2080 CDS
T05001
Symbol
thiC
Name
(GenBank) thiamin (pyrimidine moiety) biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nja
Nitrospira japonica
Pathway
nja00730
Thiamine metabolism
nja01100
Metabolic pathways
nja01240
Biosynthesis of cofactors
Module
nja_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NSJP_2080 (thiC)
Enzymes [BR:
nja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NSJP_2080 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
SLM48252
UniProt:
A0A1W1I5G6
LinkDB
All DBs
Position
I:complement(1965487..1967376)
Genome browser
AA seq
629 aa
AA seq
DB search
MSKNGSDNGHGQKAITTSPFPASRKVFVSGTQPGVRVPMREIALSPTKSMKGEAPTPNEP
ITVYDTSGPYTDPSITIDIRAGLAPSRQEWIRSREDAEQLPDVTSEYGRARAADPKLADL
RFGHVRKPLRAKPGKNVTQLHYARKGVVTPEMEFIAIRENQSREVARELASRNGHGGGTV
QHPGEAWGANIPRTITPEFVRDEVARGRAIIPANINHPETEPMIIGRNFLVKINSNIGNS
AVASSIEEEVEKMIWSIRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKV
GGKAEDLTWDIYRDTLIEQAEQGVDYFTIHAGVRLAYVPLTAQRMTGIVSRGGSIHAKWC
LAHHQDNFAYTHFEEICEIMKAYDVSFSLGDGLRPGSIADANDEAQFAELETLGELTKIA
WQHDVQVMIEGPGHVPMHLIKVNMEKQLQACHEAPFYTLGPLTTDIAPGYDHITSGIGAA
MIGWYGCAMLCYVTPKEHLGLPDREDVKVGVVTYKIAAHAADLAKGHPGAQIRDNALSKA
RFEFRWEDQFNLSLDPDTAVQFHDETLPDNAAKVSHFCSMCGPHFCSMKITQDVRDYAAS
KQVSEQQAIQIGMKEKSEEFRKAGSEIYR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacggctccgacaacggtcacggccagaaggcgatcacgaccagtcccttt
cccgcatcgcggaaggtcttcgtctccggaacccagcctggcgtgcgggttccgatgcgg
gaaatcgccttgtcaccgaccaagtcgatgaagggtgaggcgccgacacccaacgaaccc
atcacggtctacgatacatcgggtccctacaccgatccgtcgatcaccatcgatattcga
gccgggttggccccgtcccgtcaggagtggattcgttcgcgcgaggacgccgagcagctc
ccggacgtcacctcggagtacggacgcgcacgggccgccgaccccaagctggcggatctg
cgcttcgggcacgtccgcaaaccgctgcgcgccaagccgggtaagaatgtgacgcaactc
cactacgcccgcaagggcgtggtcacacccgagatggaattcatcgcaatcagggaaaac
caatcgcgcgaggtcgcacgcgaattggcctcgcggaacggccacgggggcggaacggtg
cagcatccgggggaggcttggggcgcgaacattccccgaaccatcacaccggagttcgta
cgggacgaagtcgccaggggacgggcgatcattccggccaacatcaaccacccggagacg
gaaccgatgatcatcggccggaattttctggtcaagatcaactcgaacatcgggaactcc
gccgtcgcgtcctcgatcgaagaagaagtggaaaagatgatctggtcgatccgctgggga
gccgatacggtcatggatctctccacgggaaagaacatccacgagacgcgggagtggatc
atccgcaattcgccggttccgatcggcaccgtgccgatctaccaggcgctcgaaaaggtg
ggcgggaaggccgaagacctgacctgggacatttatcgggatacgcttatcgagcaggcc
gagcagggcgtcgactattttacgatccatgccggcgtccgcctggcctacgtgccgttg
accgcgcagcgcatgaccggaatcgtgtcgcgcggcggctcgattcacgccaagtggtgt
ctagcccaccaccaggacaactttgcttatacgcacttcgaagaaatctgcgagatcatg
aaggcctacgacgtctccttcagtctgggagacgggctgcggccgggctccatcgccgat
gccaatgacgaggcgcaattcgcggagcttgaaaccctgggcgagctgacgaagatcgcc
tggcagcatgacgtgcaagtgatgatcgagggaccgggtcacgtgccgatgcacctgatc
aaagtcaacatggagaagcagctgcaggcctgtcacgaagcgccgttctatacgctcggc
ccgctcaccaccgacatcgcccccggctacgaccacatcacgtcgggaatcggcgcagcc
atgatcggctggtacggatgcgccatgctctgctatgtcacgcccaaggagcacttgggc
ctgcccgaccgcgaagacgtgaaagtcggcgtcgtgacctacaagatcgccgctcatgcg
gccgacctggccaagggccatccgggcgctcagatcagggacaatgccctgtcgaaggcg
cggttcgagtttcggtgggaggaccaattcaacctgtccctcgacccggacaccgccgtg
caattccacgacgagacgcttccggacaacgcggccaaggtctcccacttctgcagcatg
tgcgggccgcatttctgctcgatgaagatcactcaggatgtgcgggactatgccgccagc
aaacaggtgtccgagcagcaagccatccaaattggaatgaaggaaaagtctgaggaattc
cgaaaagcaggctctgaaatttaccgttag
DBGET
integrated database retrieval system
