Nitrospira japonica: NSJP_2437
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Entry
NSJP_2437 CDS
T05001
Symbol
sigC
Name
(GenBank) RNA polymerase sigma-C factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nja03021
]
NSJP_2437 (sigC)
Transcription machinery [BR:
nja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NSJP_2437 (sigC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
MRP-63
Motif
Other DBs
NCBI-ProteinID:
SLM48609
UniProt:
A0A1W1I6W5
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All DBs
Position
I:complement(2305058..2306056)
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AA seq
332 aa
AA seq
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MKRKNKPAAEAPLEPEILGPSEEDPVEEQTKTDTGSDDAPATRAAVDTTAVVPVTALQQY
LAEVRRHPYLTKEEEQRLFEEYRTHGSREAAVKLIMANLRVSVAIASEYLHTGADHMDLI
QEGNVGLMQAIKKFDPSKNVRFYAYAAWWSRAYILRYLLNTYRLVKIGTTQDQRKLFYNL
KKEKAKLERQGFAPDTKLLADRLNVRERDVVEMDQRLGNWELSLDQPIGEEQDGTLLDVL
PSQQVGADEQLAQHQLQTLFRAKLAEFVKTLDERDEDILRNRLLSETPLTLDDLGEKYGI
TKERTRQLEARIIKRIRDYIKKDVKDFDRLRV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaaaaataaaccggcggccgaggcaccgctggaaccggaaattctcggacct
tccgaagaggatccggtcgaagagcagacgaagacggacaccggatcggacgacgcgccc
gcgacgcgggcggccgtcgatacgaccgcagtcgtaccggttacggccctccagcaatac
ctggccgaagtccggcggcatccgtacctgaccaaggaagaggaacagcgtttattcgaa
gaataccggacgcacggcagccgcgaagccgcggtgaagctcatcatggccaatctccgg
gtttccgtggctatcgcatccgagtacctgcataccggcgccgaccacatggatctgatc
caagaaggcaacgtgggcctgatgcaggccatcaagaaattcgatccgtcgaagaacgtg
cgcttctatgcctatgccgcctggtggtcacgggcttacatcctgcgctacctgctcaat
acctatcgtctcgtcaaaatcgggacgacacaggatcagcgcaagctcttttacaatttg
aagaaggagaaagcgaagctcgaacggcagggctttgcgccggacacgaagctgctcgcc
gaccggttgaacgtacgggaacgagacgtcgtcgaaatggatcagcgtctggggaactgg
gaactctccctcgaccagccgatcggcgaagaacaggacggcaccctgctcgacgtgctg
ccctctcagcaggttggagccgatgagcaactcgctcagcaccaattgcagacgctgttc
cgggcaaagctggcggagttcgtcaagacgttggacgagcgggacgaggatattctgcgc
aatcgtctcttgtcagagacgccgctcacgctcgacgatctgggtgagaagtacggcatt
accaaggagcggaccaggcagttggaagctcgcatcatcaagcggattcgcgactatatc
aagaaggacgtcaaggatttcgatcgcttgcgtgtctga
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