Nitrospira japonica: NSJP_2585
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Entry
NSJP_2585 CDS
T05001
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
nja
Nitrospira japonica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpvB
TcdB_toxin_midN
TcdB_toxin_midC
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
SLM48752
UniProt:
A0A1W1I6W0
LinkDB
All DBs
Position
I:2447289..2453603
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AA seq
2104 aa
AA seq
DB search
MPEATGTEDRGKEPRENSFQITPPAIALPKGGGAIHGMGEKFGVNPVTGTGSLTIPIYTS
PGRAGFGPQLNLSYDSGSGNGPFGFGWSLSLPSVSRKTAKGLPRYDDAADSDVFILSGAE
DLVPILVQQGAQWIPEVVPSRTIGTKTYHIRRYRPRIEGLFARIECWTNQQDDTDVSWRS
ISKDNLTTWYGKTPESRVFDPADPSHIFSWLICESHDDKGQAIVYSYKPDDSEGLLSGRA
HEKNRTTAIRGTNRYLKRIKYGNRRSRLVEPDPDRSQWLFEVVFDYGEHDSDRPQSLNEP
KKWECRQDPFSTYRAGFEVRTYRLCQRVLMFHHFPDEDIGADCLVRSTDLTYSYERQADD
ARSPTYSFIESVEQVAYQRNIGGTYDRRSFPPVTFEYAATAVSETIRDVDPDSLDNLPFG
LDGRHYQWVDLDGEGLAGILTEQGGSWLYKRNLSPATEREVDGVTITDVCLAPVELVASK
PSLGTLRAGGQQLLDLAGDGQLDLVLLPGPAQGFYERTPDGQWTTFRSFQSVPNCDWFDP
HLKFIDLTGDGHADLLITEDDVLRWHPSLAEEGFGPASYVRQARDEETGPRLILADGTES
IVLADMSGDGLVDIVRIRNGEICYWPNLGYGRFGAKVTMDQSPWFEEPDLFDPLRLRLAD
IDGSGTTDILYLSEQGVHLYFNQSGNGWAVRQSLKAFPPVDDLAGIMTADLFGNGTACLV
WSSPAPGNARRPMRYVDLMGGRKPHVMVRTANNLGAETRIEYAPSTKFYVADRLAGKPWA
TKIPFPVHCVEKITVADKWRRATFSFTYSYHHGYFDGIEREFRGFGRVEQTDTEDYGAFA
GGNVESPYITDTKELYQPPVKTVTWFHTGAFLDRHTVLGHFQDEYFPNWYEALKPDDTTV
LGGFRENTLPEPDLIVQDLSADEWRQALRACKGMVLRREIYELDVDKLAVGVHDPVRLFS
TAYHNCHIRRVQPAQGNPHAVFLVTECESITYQYELDLTTEILTPDPRVAHTLNLRIDEF
GNVQQSVAAVYPRFGRHRDASLPNETEDLVAAIQRERHLVYTETRYTADAQDQDNYRLRL
PCEVSRYDVTGITPLNGGYFALGELRSCRLSPGRYQIDPAPGDVEVVEIPYHQVADGTSI
QKRLIERLRTLFFETDLATFLPLGGLNSLALKYEDYKLALTDDLLEAVFGTKLAQLAWDG
LKDVTMSGYISGQPLGARFPNEAIDGEYWVRSGTAAFSDDAAEHFYLPERYADPFGHVTT
LLFDRTYDLFIKSSTDALGNTAAVEAFDYRVLAPSALKDMNDNLTEMRYDILGLPAVMAM
KGKGTQGDSLDGITPAVLNPSLDQLIGYFQGAFDNGEARRLLGNATVRYVYHMGEERQGT
EVTFAVHPPVAGSIVRERHVAQLGPDEESRLQAAFEYSDGLGALLVTKSQAEPAAGSTVL
RWIASGKTVFNNKGKPVKQYEPYFSTSEHRFDDAEAEAEMGVTPIMYYDAVGRLIRTELP
DGSFSRVVFSPWHVTAFDRNDTAYDPTGHAHSDWYKRRTDPAHPRFGEFNAVDDRRAADL
VKVHAMTPAQVLFDSRGREAMSVAHNAYAYPNGGSSGDERYVTFTKLDAEGKPLWIRDGN
RNLVMQYITPPKPGRWSEQPNETVPAGSVPCYDLAGHPLYQHSMDAGDRWTLNDAAGMSL
YAWDLNERRESDGSLVVEDRQFHSTYDALHRPSEQWLTVNASQPQLIVRFGYGEREAGAK
QANIRGRLYEHIDQSGRQTADAYDFKGNVVTATRQLAAGYREPVIGWQPGSSTAVLEAER
FEQRTEYDAVNRITRRYNWHSGTGGLVAVYELTYNERGALQREEIVVRGLKTPDGYQEST
QSRRTAAIAGITYNAKGQRERIEYGNGTTTCYDYDAETFRLTQLRTTRPAYDPPFPSRRS
QFKNDRVLQNLFYAYDPVGNIMEIEDDAYEPAFFDNQQVDPKSQYVYDALYRLIFAMGRQ
NGALRGAPANIEPDAPGLSFPVRPTDPHALSAYRQTYRYDPAGNILRLRHDAGLGSWTRD
YAYAFEDAAQPASNRLWQTWDGGDRTQAVSYAYDVHGSMQNLANVTPAQYVRWDYRDMIR
ELEL
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcgacaggaacggaagaccgaggcaaggaacccagagaaaactccttccag
attacgccgccggcgatcgcgctccccaagggcggaggcgccatccacggcatgggcgaa
aagttcggcgtcaatccggtgacaggaaccgggtcgctgacgatcccgatctataccagt
ccgggccgggccggattcgggccgcaactcaacctgtcctacgactccgggtccggcaac
gggccattcgggttcgggtggagcctgtctcttccatccgtctccagaaaaacggcgaag
ggcctcccgcgttacgacgatgcagcggactcggatgtctttattctttccggtgccgag
gatctggttcccattttggtgcagcagggggctcaatggattcccgaggtcgttccatcg
agaacgatcggcacgaagacctaccacattcgacgctatcggccccgtatcgagggcctc
tttgcccgtatcgagtgttggacgaatcaacaagatgacaccgacgtctcctggcgatcg
atttcgaaagacaacctcacgacctggtacgggaaaacacctgaaagccgagtcttcgac
cctgccgacccgtcccacatcttcagctggcttatttgcgaaagtcatgacgacaagggg
caggccatcgtgtactcgtacaagccggacgactcggagggcctcttgtccggccgggcg
cacgaaaagaaccggacgacggcgatccgggggacgaatcgctatctcaagcgcatcaag
tatgggaataggcgctcccgcctcgtcgagccggatccggaccggtcccaatggctcttt
gaagttgtattcgattacggcgagcatgattcggacaggcctcagtcgctgaatgagccc
aagaagtgggagtgccggcaggatccgttctccacctaccgcgccggcttcgaagtgcgc
acctatcgtctttgccagcgcgtgctcatgtttcaccattttcccgacgaagacatcggc
gccgattgtctcgtccgttccaccgatctcacctactcatatgaacggcaggcggacgac
gctcgcagtcccacttactcgttcatcgagtccgtggagcaggtggcctatcaacggaac
atagggggaacgtacgaccggcgctcgtttcctcccgtcacatttgagtatgccgcaacg
gcagtgagcgagacgattcgcgacgtcgatccggacagcctggacaatcttccgttcggt
ctggacggccgtcactatcaatgggtggatctggacggcgaagggctcgccggtattctc
accgagcagggtggcagctggctctacaagcggaacctcagtcccgcgacggagcgagag
gtcgacggcgtgacgatcacggacgtctgtcttgcgccggtcgaactcgtggcttccaag
ccctcattggggacgcttcgcgccggaggacagcagctgctcgatctcgcgggcgacgga
caactcgacctcgttcttcttcccggaccggctcaggggttctacgagcgaacgccggat
gggcagtggacgacgttcagatcgtttcaatcggttccgaactgcgactggttcgatccg
catctcaagttcatcgatctgaccggagacggtcatgcggacctcctgatcaccgaagac
gacgtcttgcgctggcatccctcgctggccgaggagggattcggacctgcgtcctacgtg
cggcaggcgcgcgatgaagagacagggccgcgactcatactcgcggacggcacagagtcg
atcgtgctcgcggacatgtcgggtgacgggttggtcgatatcgtccgcattcgaaacgga
gaaatatgttactggccgaatctggggtacggaagatttggcgccaaggtcacgatggat
cagtcgccttggttcgaggagccggatcttttcgatcccctacgcctccgcctggcggac
atcgatggatccgggacgacggatatcctctatctgagcgaacagggcgttcacctctat
ttcaatcaatccggcaacggatgggcggtcaggcagtcgttgaaggcctttcctccggtt
gacgatcttgcagggatcatgacggcggatctgttcggcaacggcaccgcatgcctggta
tggtcgtcgccggctccgggcaatgcgcgccggccgatgcgctatgtggacctcatggga
ggccggaaaccgcacgtcatggtccgtacggcgaataatctcggagccgagacgcgtatc
gaatacgcgccgtcgaccaagttttatgtggcagaccgccttgccggcaagccgtgggcg
acgaaaattcctttcccggtccattgcgtggagaaaatcaccgtcgcggacaaatggcgc
agggccacgttttcattcacctacagttatcaccatggctacttcgacggcatcgaacgg
gaatttcgcggattcggccgtgtcgaacagacggataccgaagactacggagccttcgcc
gggggaaatgtcgaaagcccctacatcaccgacaccaaggaactgtatcagccgccggtc
aagaccgtgacctggtttcatacgggagcgtttctcgatcggcatacagtgctcggccat
ttccaggacgaatattttcccaactggtacgaggcgctgaagccggacgacacgaccgtg
ctcgggggctttcgcgagaacacgctgcccgagcccgatctgatcgtccaggatctttcc
gcggatgagtggcgtcaggcgttgcgggcttgcaagggcatggtgctccggcgggaaatc
tacgaactcgacgtggacaagctggcggtcggagtgcatgacccggtcaggttgttctcc
acggcgtaccacaactgccatatccggcgggtgcagcccgcacagggcaatccccatgcg
gtgtttctcgtcaccgaatgcgagtccatcacctatcaatatgagttggacctgacgacg
gagatcctgacgcccgaccctcgtgtcgcccatacgctgaatctgcgcatcgacgagttt
ggcaatgtccaacagagcgtcgcggccgtgtaccctcggttcggaaggcaccgtgacgct
tcgctgccgaatgagacggaagacctggttgctgccatccaacgggaacggcacctcgtg
tacaccgagacgcgctacacagcggatgctcaagatcaggacaattaccggctccgcctt
ccctgcgaggtgtcccgttacgacgtgacgggcatcactccattgaacggaggttatttt
gcattgggcgagttgaggagctgtcggctgagccccggccgatatcaaatcgaccccgct
ccgggagacgtcgaggtggtggaaattccctaccaccaagtcgccgacgggacatcgatt
cagaaacggctgatcgagcggctccgcacgttgtttttcgagacggacctcgcgaccttc
ctacctctcggcgggttgaacagcctcgcgttgaaatatgaggattacaagctggcattg
accgatgacctgctcgaggccgtcttcggaaccaaactggcccagctcgcttgggacggt
ctcaaagatgtgacgatgagcggatatatcagcgggcagccgcttggcgctcgctttccg
aacgaagccatcgacggggaatattgggtcagatccgggacggccgcgttctccgacgat
gcggccgaacatttctacttgcccgagcgttatgccgatcccttcggtcacgtcacgacg
ctgttgttcgatcggacctacgatctgttcatcaagtccagcaccgatgcgttgggtaat
accgccgccgtcgaagcgttcgattatcgcgtgctcgccccgtcggccttgaaggatatg
aacgacaatctgaccgaaatgcgctacgacattctcggcttgcccgccgtgatggcgatg
aaaggaaaaggaactcaaggagacagtctggacggcatcacccccgcggtcctcaacccg
tcgctcgatcaactcatcggctactttcagggtgccttcgacaacggggaggcgcgccgt
ctgctcggcaacgccaccgtacggtatgtctaccacatgggagaggaacggcaaggcacg
gaagtgaccttcgcggttcatccgccggttgccgggagtatcgtgcgggagcgacatgtt
gcgcaactcggtccggatgaagaaagccggctgcaggcggcgtttgaatattccgacgga
ttgggtgcgctgttggttacgaagtcgcaggcggagccggcagcgggatcaacggtcctg
cgctggatcgcctcgggcaagacggtcttcaacaacaagggcaagccggtcaagcaatac
gagccgtacttcagtacgagcgagcatcgattcgacgacgccgaggctgaagctgaaatg
ggcgtcacgccgatcatgtattacgatgccgttgggcgcctcattcgcaccgaactgccc
gacggttccttcagccgcgtcgtattctctccctggcacgtcacggctttcgatcgcaac
gacacggcctatgatccgacgggacatgctcacagcgactggtacaagcgcaggacggat
cccgctcatcctcgattcggcgaattcaacgctgtggacgatcggcgggctgccgatctc
gtgaaagttcatgccatgacccctgcgcaggtgttgttcgacagtcgggggcgcgaagcg
atgtccgtcgcccataatgcctatgcctatcccaacggaggttcgagcggagacgagcgg
tacgtgaccttcaccaagctcgatgctgaaggcaagccactctggatcagagacgggaac
cgaaatctcgtaatgcaatacatcacgcctccgaaaccgggccgatggagcgaacagccg
aatgaaacggtacctgccggctccgtgccctgctacgacctggcaggacatccgctgtat
cagcacagcatggatgccggcgatcgatggacgctgaacgacgcagcgggcatgtccctc
tatgcctgggatctcaacgagcgccgtgagtcggacggctctctcgtcgtggaggaccgc
cagtttcattcgacgtacgacgcgctccatcggccgtccgaacaatggctgacggtcaac
gcgtctcagccccaattgatcgtacggtttggttacggagaacgtgaagccggcgcgaag
caggccaatatacgcggccggctttatgagcacattgatcaaagcggccgccagacggcc
gatgcctacgatttcaagggaaacgtcgtgacggctacgcgacaactcgccgcaggctat
cgcgagccggtcatcggatggcaaccgggcagttcgaccgccgtcttggaggcggagcgg
ttcgagcagcggaccgaatacgacgcggtgaatcgcatcactcgccgctataactggcat
tcgggcaccggcggcctcgtcgccgtatatgaactcacgtacaacgagcgcggcgcgctt
caacgggaagaaatcgtcgttcgcgggctgaagacgccggatgggtatcaggaaagcacg
cagagccgcaggacggcggcgattgccggcattacctacaatgccaaaggccaacgagag
cgaatcgagtatgggaacgggacgaccacgtgctacgactatgatgctgaaacgttccgg
ctgacccagttgcgcacgacgaggccggcatacgatccaccgttcccgagccgccggtcg
caattcaagaacgaccgagtgctccagaacctgttctacgcctacgatcccgtcggcaac
atcatggaaatcgaagatgatgcgtatgaaccggcgttcttcgacaaccagcaggtcgat
cccaagagccagtatgtctacgatgcgctataccggttgatttttgcgatggggcgccag
aacggagccttgcgcggtgcgccggcgaatatcgagccggatgcccccggcctgtcattt
ccagttcgcccgacggatccgcacgcactgagcgcctacaggcagacgtatcgctatgac
cccgctgggaacatccttcgcctccgccatgacgcaggcctcggcagttggacgcgggac
tacgcctatgcatttgaggatgcggcgcagccggcgagcaaccgcctctggcaaacgtgg
gacggcggcgacagaacgcaggcggtctcctatgcctacgacgttcacggcagcatgcag
aacttggccaacgtgacgccggctcagtacgttcgctgggactatcgcgacatgatacgc
gagttggaactatga
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