Nitrospira japonica: NSJP_2595
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Entry
NSJP_2595 CDS
T05001
Symbol
lcfA
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nja
Nitrospira japonica
Pathway
nja00061
Fatty acid biosynthesis
nja00071
Fatty acid degradation
nja01100
Metabolic pathways
nja01212
Fatty acid metabolism
nja02024
Quorum sensing
nja04146
Peroxisome
Module
nja_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NSJP_2595 (lcfA)
00071 Fatty acid degradation
NSJP_2595 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NSJP_2595 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NSJP_2595 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nja01004
]
NSJP_2595 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nja04147
]
NSJP_2595 (lcfA)
Enzymes [BR:
nja01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NSJP_2595 (lcfA)
Lipid biosynthesis proteins [BR:
nja01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NSJP_2595 (lcfA)
Exosome [BR:
nja04147
]
Exosomal proteins
Exosomal proteins of breast milk
NSJP_2595 (lcfA)
Exosomal proteins of breast cancer cells
NSJP_2595 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
SLM48762
UniProt:
A0A1W1I6W9
LinkDB
All DBs
Position
I:2476356..2478014
Genome browser
AA seq
552 aa
AA seq
DB search
MPERLWMSHYPHGVPPQIPLSSETLLDVLSGSARRFSRRPALYFFGKTISYHDCQALVDK
FACGLAALGVRKGDRVALCLPNCPQTVIAYFGILRAGGIVVACNPTYTEHELSHQLHDAG
AKAIVVLDQMYQKIRHLDIELVIVTQITDFMTTIARYLYNHRNNRHVVDIPIGGATRLFH
DVLNLTDGDPAQLPVVTPEDIAVLQYTGGITGLSKGAELRHRNLTANIRQLVSWFSPAER
VESFLAALPLFHVFGMTVTQNICLAVGGCMILVPDPRNMSVLLSLLRKKQPTVITLVPAF
VRKLLEHCVATDFASTKFVICGGAALPYELLKKFKEHTGHLIVEGYGLSEASPVTHCNIP
RGLSVKRSIGLPVPNTDARIVDESGCDVREGEIGELWVRGPQVMERYWNNPVETANAVKP
GGWLATGDMARTDQDGFFYVVDRKKDMILSNSGFNVYPAEVEQALQLHPLVQDAAVIGVQ
AGDGGESIKAFVVPKTTALTAEDLVTHCRHYLAAYKVPRKIEFRNELPRSILGKMLHRVL
RVEEQARLQPNG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacggctctggatgtcgcattatccgcacggagtcccgccgcaaattccgctg
agttccgaaacgctcctcgacgtgttgtccggcagcgcgcgtcgcttctcccgccgtccg
gcgctctattttttcggcaagacgatttcctatcatgattgtcaagcgctcgtggacaag
ttcgcctgcggcctcgccgcgctgggagtgcgcaagggagaccgggtggccttgtgtctg
cccaattgcccgcaaaccgtcatcgcctatttcggcattctgcgggcgggcgggatcgtc
gtggcctgcaatccgacctatacggagcacgagctgtctcatcagttgcacgatgccggg
gccaaggcgatcgtcgttctcgatcagatgtaccagaagatcaggcacctcgacatcgag
ctcgtcatcgtcacgcagatcacggatttcatgaccaccatcgcgcggtatctgtacaac
caccgcaacaatcgtcatgtggtcgacattccgatcgggggcgcgaccagactctttcat
gacgtcctgaacctgacggacggcgacccggcgcagctgcccgtggtgacgccggaagac
atcgccgtcctgcaatatacgggtgggatcacgggcctttccaagggggcggaacttcgc
catcggaacctgaccgccaatatccgccagctggtcagctggttctcgccggccgaacga
gtcgagagctttctggcggcgcttccgctgtttcacgtgttcggcatgacggtgacgcag
aatatctgtctcgcggtcgggggatgcatgatcctggttcccgatccgcgcaacatgtcg
gtgttgctctccctgctccgcaagaaacagccgacggtgatcacgctggtgccggcattt
gtcagaaaattgctcgaacactgcgtggcgacagatttcgcctccacgaagttcgtgatc
tgcggcggggcggcattgccgtacgaattgctgaagaaattcaaagagcacacgggccac
ctcatcgtcgaaggctacggcctgtccgaggcttctcccgtcacacactgcaatattccg
cggggactatcggtcaagcggtccatcggcttgcccgtccctaacaccgacgcccgcatc
gtggacgaatccggctgcgacgtacgggaaggggagatcggcgaattgtgggtccgcggg
ccgcaagtcatggaacggtattggaacaacccggtggagaccgccaacgccgtcaaaccc
ggcggatggctcgccacgggagacatggccaggaccgaccaggacgggttcttctatgtc
gtggatcggaagaaggacatgatcctctcgaattcgggattcaacgtgtatcctgccgag
gtcgaacaggcgttgcagctccatcccctcgtacaagatgcggctgtcatcggcgtacag
gcgggagacgggggtgagtcgatcaaagcattcgtagtgccgaagaccaccgccctgacc
gccgaggacctggtgacccattgccggcattatctggcagcgtacaaggtgccgaggaaa
atcgaatttcgcaacgagctgccccggtctatcctgggcaagatgttgcatagggtgctg
cgggtggaggaacaggctcgacttcagccgaacggctag
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