Nitrospira japonica: NSJP_3357
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Entry
NSJP_3357 CDS
T05001
Name
(GenBank) conserved protein of unknown function
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_3357
Enzymes [BR:
nja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NSJP_3357
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NSJP_3357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
SLM49524
UniProt:
A0A1W1I931
LinkDB
All DBs
Position
I:3212877..3216083
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AA seq
1068 aa
AA seq
DB search
MLKVVTGSFHPHLESAFVEHLQLAKAGDPFVPVAVLVPSAPLLERLKRLLTLDRQLSFLN
VHFLTFHQLALRLVDEMTGDTARPAPVHVVDDLFFEQLVRHLVKTRLSGLTALQQVGHSS
GTWGALWSSIRDLKDAGVDPAEARRGVTEGCFDEDDREWLLALFSLYAAVQDVGRALNVG
TADDLAQSLLPFVPASPFIRSLRHVFYYGFYDLTQIQLSLFETVTAAAPATLFFPLEGER
SFTFARRFFERHIQRQVTSPESVMTPGDSPQREVGSPVLSVRSAIGLDQELAATCRTILE
LVETNGYRFDEIGVVARTLDPYRLHLHAVFDRHRIPFTTTTARPLIHEPLCKALLQLASL
PTNDFYRATMLDLVTSPLFVTSLNHDRSPFYRPEQWKLLVPSLQITRGREEWARLKQAGQ
WSSGPDGEADEETGLPLPLDIAPDVVELLWHVVATLIDGCAVLPQRGTIGHMLEAFQPLA
LRHLRRLDGGQAGAPDRGTARLQAAWDAIERTWASLAELEPIAETLTWIEFVELLTHAFE
RTTLVLDQPAPAGVMVLDAMAARGLSFKALFVLGLNDKMFPRYIREDAFLRDRHRRVLDA
TLGFKIDEKLAGYDEESLLFALLRRAAGSRLYLSHQRADDAGRTLAPSPYLWDIARLSGL
DAQATDMIPRRLTDLIAQRPAIRQTLPPADLARWMAMNGENPADLLQSVQGEADLLRHAV
EALGHIEDDHAALAAYDGITGPLTSHWSRSMQRGLAPTPLERYARCPFQYFSVDVLKLDP
VRVPASQEPDAALLGTLCHGALRRCYEALLAAGWPANALSDDAVNGAAVTAVEQAAAECA
VHQRTGHYLLWELAKAATIDLITAAVVSDSDRLAAEGFAPFAFEVEAEGTLRIESGGEGV
PMKFHGRVDRIDRHNASGALRIIDYKFKSNSAMKTDDRHLLQSAIRGSRLQPPLYTSLDL
PAGGKADAVQFFFLAPAWESPIARSTFNASDWSSETGTLIHRTLAGLIDGMKRGRYFILP
GTHCTTCPYRVLCRREHASTWWRAHRAGEQKQLAALRKMTVKKVTDVR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggtcgtcaccggttcgtttcatccccatctcgagtccgcgttcgtcgaacat
ctccaactggccaaggccggagatccgttcgttcccgttgcagtgctcgtcccctcggct
cccttgctcgagcgactcaagcgcctgctgaccctggatcgacaactttccttcctgaac
gttcacttcttgacctttcaccaactggccctgcggctcgtcgacgaaatgaccggcgac
accgcgcgcccggctccggtgcatgtcgtcgacgatctcttcttcgagcaattggtgcgt
cacctcgtcaagacgcggctttccggcctgaccgccttgcagcaggtcggccattcttca
ggaacctggggagccttgtggtcatccatccgtgacctgaaggatgcaggggtcgatcct
gcggaagcacggcgcggagtcaccgaaggctgcttcgacgaggacgaccgggagtggctc
ctcgccctgttctcactctacgccgccgtacaggacgtcggacgggcgctcaacgtcgga
accgcggacgatctcgcgcagtccctgttgccgttcgtcccggcttctccgttcatccgc
tcgctccgccacgtcttctattacgggttctacgacctgacgcagatccaactctcgctg
ttcgaaacagtcaccgccgccgcaccggccacgctgttcttcccgctcgagggggaacgt
tccttcaccttcgcacgacggtttttcgaacggcacatccagcgacaggtgacgtccccg
gagtccgtcatgacgcccggcgattcccctcagcgggaagtcggttctcctgtcttgtcc
gttcgaagcgccatcggtctcgaccaggaactggccgcgacctgtcggacgatcctcgag
ctcgtcgagaccaacggataccggttcgacgagatcggcgtggtggccagaactctggat
ccctaccgtctgcacctgcatgccgtgttcgaccgccaccgtattcctttcaccacgacg
acggcacgcccgctgattcacgagccgctgtgcaaagcgctgcttcagctggcctccttg
cccacgaatgacttctatcgcgccacgatgctcgacctggtgacgtcgccgctcttcgtc
acctcgctgaaccatgaccgatcgcccttctatcgtcccgaacagtggaaactcctcgtt
ccatccctgcagatcacgagagggcgggaagagtgggccagattgaagcaggccggccaa
tggtcgtcgggaccggacggggaagcggatgaagaaaccggtctgccgctgccgttggat
attgcgccggacgtcgtcgaactcttatggcacgtcgtggcaacgctcatcgacggctgc
gccgtactgccgcaacgaggcaccatcgggcacatgctcgaggcctttcagccgctggcc
ctaaggcatctgcgccgtttggatggaggacaagccggcgcgccggatcgcggaacagcc
cgtctccaggcggcctgggatgccatcgagcgcacatgggcgtccctcgccgaattggag
ccgattgccgagacgctgacctggatcgaattcgtcgaactgctcacccacgcgttcgaa
cggacgacgctggtcctggatcagccggcgccggcgggcgtgatggtgctcgacgccatg
gccgcccgcggtctgtcgttcaaggcgctgtttgtcctcggcctcaacgacaagatgttt
ccccgttacatccgggaagacgcctttctccgcgatcggcaccggcgcgtattggacgcc
acgctcggcttcaagatcgatgaaaagctcgccggctacgacgaagagtcgctcctgttc
gctctgctccgccgggccgccggctcccgattatatttgtcgcatcagcgggccgacgac
gcgggccgcacgctggctccctctccctatctctgggacatcgctcgcctctccggtctc
gacgcgcaggcgacggacatgattccccggcgtctgaccgatctgatcgcccagcgaccg
gcgatacgacagacgctcccgcccgccgacctcgcgcggtggatggccatgaacggggag
aatccggcagaccttctgcaatcagtccaaggtgaggcggacctccttcgtcatgccgtc
gaggcgctgggccatatcgaagacgaccacgcggcactggccgcatacgacggaataacc
ggtcccttgacgtcccactggtccaggtcgatgcagcgggggttggcgccgacgccgctc
gagcggtatgcgcgctgcccgtttcaatatttttccgtggacgtgctgaagctcgacccg
gtgcgagtgccggcgtcacaggaaccggatgcagccctgctcggtaccttgtgccacggc
gccctccgtcgttgctatgaagcactcctggccgccggttggcccgcgaacgcgctgtcg
gatgacgccgtcaacggtgcggccgtcacggctgtcgaacaggcggcagccgagtgcgcc
gtgcatcagcgcaccgggcactatctgctatgggaactggcgaaagccgcgacgatcgac
ctgatcacggccgcggtcgtctcggattcggacagactggcggcggaggggttcgctccg
ttcgcctttgaagtggaggcggaaggcacccttcggatcgaatcgggaggcgagggcgtc
cccatgaaattccacggccgcgtggaccggatcgaccggcacaacgcgtcgggcgccttg
cggatcatcgactacaaattcaagagcaactcagcgatgaagacggacgaccggcacctc
ctccaatccgcaatccgcggctcccggctccaaccccctctctacacctcgctcgatctt
ccggcaggcggcaaggcggacgccgttcagttcttctttctcgcccctgcgtgggagtct
ccgattgcacgatccacgttcaacgcaagcgactggtcctcggaaaccgggacgctgatc
catcggaccctcgccggcttgatcgacggtatgaaacgcggccgatacttcatcctgccg
ggaacccattgcacgacctgtccctatcgggtgctctgccggcgcgaacatgcgtcgacc
tggtggcgagcgcaccgggcgggcgaacagaagcagctcgcggcccttcgcaagatgacg
gtgaaaaaggtgaccgatgtccggtga
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