Nitrospira japonica: NSJP_3980
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Entry
NSJP_3980 CDS
T05001
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
nja
Nitrospira japonica
Pathway
nja00541
Biosynthesis of various nucleotide sugars
nja01100
Metabolic pathways
nja01250
Biosynthesis of nucleotide sugars
Module
nja_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NSJP_3980 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nja01005
]
NSJP_3980 (kdsB)
Enzymes [BR:
nja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NSJP_3980 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
nja01005
]
Lipid A
NSJP_3980 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
SLM50147
UniProt:
A0A1W1IAR9
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Position
I:complement(3880165..3880965)
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AA seq
266 aa
AA seq
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MTGMKPQVMVVIPARYGSSRFPGKPLVKLGQKPLIQHVYEQAASCRSVTEVLVATDDERI
RETVERFGGRVAMVTGDYRTGTDRVAAVARTVSGEYFLNLQGDEIPETPALLKDLIDSFL
GCDAEMGTLKRAMGTDEALDNPAAVKVVTDSDGHALYFSRAPIPLVRDGIRGQVVGGLHY
LHLGLYIYRREALLRFASWPTGQLEDAEKLEQLRALQQGMRIRVWDTSHRSLRVDTPEDA
AEVADKLRRHESRKQDSPIGGTVSAR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcatgaagcctcaagtcatggtcgtcatccccgcacggtacggctcgtcgcgg
tttcccgggaaaccgctggtcaagttgggacaaaagccgctgatccagcatgtctacgag
caggcggcttcttgccgctcggtcacggaggtgcttgttgcgacggatgatgaacggatc
cgggaaacggtcgagcggttcggtggccgcgtggccatggttacgggcgattatcggacc
ggtacagaccgggtagccgccgtggcgcggacggtatccggcgagtattttctcaatctg
cagggagacgagattcccgagactccggcgcttctcaaagatctgatcgattcctttctc
ggctgcgatgcggagatgggtaccttgaaacgcgcgatgggcaccgacgaggcgctcgac
aatcccgcggcggtcaaggtggtgacggattcggacggccatgcattgtatttctccagg
gctcccatcccgctcgtgcgcgacggcattcgaggacaagtcgtgggcggattgcattac
ctgcatcttggtctatacatctatcgtcgcgaggcgctgttgagatttgcctcgtggccc
acgggtcagctcgaggatgccgagaagctcgaacagcttcgcgcgcttcaacaagggatg
cggattcgcgtctgggacacgtcgcatcgttcgctgcgggtcgatacgccggaggatgcc
gcggaggtggcggacaagttgcggcggcacgagtcacggaagcaagattcaccgattggc
gggacggtgtcggctcgatga
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