Nitrospira japonica: NSJP_4064
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Entry
NSJP_4064 CDS
T05001
Name
(GenBank) putative O-antigen export system, permease protein RfbA
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
nja
Nitrospira japonica
Pathway
nja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NSJP_4064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nja02000
]
NSJP_4064
Transporters [BR:
nja02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
NSJP_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
SLM50231
UniProt:
A0A1W1IBE1
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All DBs
Position
I:complement(3969182..3970060)
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AA seq
292 aa
AA seq
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MTAAKDIFAPTPTLQVDVAGGHRILIEPTSSLFHLDFGAIWMHRELLLFLAWRDVKARYA
QTAMGIGWALVQPLLSMAIFTVIFSYWAKLPSDGLPYPLFAFAALLPWLYFSRSLDKSAG
SLVAEAGLIKKVYFPRVIIPISATLVGLVDFFVGLVLLIGMMIWYGVVPTYGVLALPFLL
LLALASSLAVSLWLSAIHVKYRDIGAVLPLIIQLWMYASPVVYSVNMVPEKWRPLYSLNP
MVGVIEGFRWALLGKVSPDFLAIGVSTGVVIMLLLGGLLYFKWMERTFADVI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagctaaagacatctttgctccgacacctactctgcaagtggacgttgcaggc
ggccaccgtattctcattgaaccaacaagcagcctttttcacttagactttggcgccatc
tggatgcatcgggagttactgctattccttgcatggcgcgatgtgaaagctcgctatgca
caaacggcaatggggattggctgggcactcgtgcagccattactttccatggcgattttc
acggttatctttagctactgggcgaaactcccgtcagacgggcttccatatcctctcttc
gcctttgcggcattacttccctggctgtacttctcgcgaagtcttgataagagtgccgga
agcttggtcgcggaagccggattaatcaaaaaggtgtatttccctcgagtaatcattcca
atctctgccacactggttggactagtggatttcttcgtggggttggtgctgttgatcgga
atgatgatctggtatggcgttgttccaacatacggggttttggcacttccctttctactc
ctactcgcacttgcctcttcactggccgtgtcactgtggctgtcggccatccatgtcaaa
tatcgagacattggagccgtacttcctctaatcattcagttgtggatgtatgcttctcca
gtcgtgtattcggtgaacatggtgccggaaaagtggcggccgctctacagtctcaatccg
atggttggagtgattgaaggatttcgttgggctttacttggaaaggtaagtcccgatttt
cttgcgattggcgtgagtacaggagtagtgatcatgcttctcttgggtggtcttttatat
ttcaaatggatggagcggacgttcgcggacgtaatctaa
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