Nitrospira japonica: NSJP_4110
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Entry
NSJP_4110 CDS
T05001
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nja03016
]
NSJP_4110 (truA)
Enzymes [BR:
nja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NSJP_4110 (truA)
Transfer RNA biogenesis [BR:
nja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSJP_4110 (truA)
Prokaryotic type
NSJP_4110 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
SLM50277
UniProt:
A0A1W1IB46
LinkDB
All DBs
Position
I:4014611..4015351
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AA seq
246 aa
AA seq
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MATVKLIVEYDGTAYAGWQRQPDQPTIQEALETAVRGLTQIDVSIVGAGRTDAGVHALGQ
VASFRIDKNWTPREWIKGMNARLPEDIAVRSAGLMPDDFHARYAASGKLYEYRILNRPAR
SAVDRRYVWHLHKPLDADAMQQAAALLPGSRDFSSFEGSLTDNEDPMCNLQRLSIDRDGE
YLLIQAYADRFLKHMVRAMVGTLVEVGLRQRSAEEIPVMLAAKDRTKAGRTAPAHGLFLL
HVDYHQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtcaaactgatcgttgaatacgacggcaccgcgtatgccggctggcaacgg
cagccggaccagccgaccattcaagaggcgctcgaaacggccgtacgaggtctgacgcag
atcgacgtgtcgatcgtgggagcgggacgcaccgacgccggtgtccacgcattgggacag
gtcgccagttttcggatcgacaagaactggactccgcgggagtggatcaagggcatgaac
gccaggttgcccgaggacatcgccgtccgctccgcgggcctcatgcccgacgacttccac
gcgcgctatgcggccagcggaaaattgtacgagtaccgcattctcaaccggccggctcgc
tcggccgtcgatcggcgttacgtatggcaccttcacaaacccttggacgccgatgcgatg
cagcaagccgccgcgttgctccccggctcgcgggatttctcgtcgttcgaaggttcgctg
accgacaatgaagaccctatgtgcaaccttcaacggctgtcgatcgatcgtgacggcgag
taccttctgatccaagcctacgccgaccgtttccttaaacacatggttcgcgccatggtc
gggaccctggtagaagtgggcctccggcaacgaagcgccgaggaaataccggtaatgctt
gccgccaaagaccgcaccaaggccggacgaaccgcaccagctcacggtctgtttctccta
cacgtcgattaccaccaataa
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