Candidatus Njordibacter sp. Uisw_002: ABXT42_02410
Help
Entry
ABXT42_02410 CDS
T11338
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_02410
Enzymes [BR:
njo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABXT42_02410
DNA repair and recombination proteins [BR:
njo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABXT42_02410
Prokaryotic type
ABXT42_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XOJ99834
LinkDB
All DBs
Position
complement(500066..501484)
Genome browser
AA seq
472 aa
AA seq
DB search
MSLASPITIMWFRQDLRLQNNPALSAAFTASNVLPIYILDDETAGQHRMGAASRWWLHHS
LTKLDASLGNALNVYSGNAAMIIEDLCQRFDVEAVFWNRCYEPHNIEQTKHIKIQLSALD
IKANSINGSLLNEPWSVFKKDGSPYKIFTPYHREACKVDQPTALLPAPVLPQTVVVDPKA
TDLESLSLLPKIKWDTSFYEQWTPGEEGAFLALNRFLADGINNYKEGRDRPALKSFSSLS
PHLHFGDISPDQIINALLTVEDDQNSEHFKKEIRWREFSYYLLFHFPGLPEQNLKPNFDK
FPWENNPNYLKCWQQGLTGYPLVDAGMRELWQTGYMHNRVRMVTASFLIKNLLVDWRLGA
SWFWDCLVDADLASNSASWQWVAGCGTDASPYFRVFNPITQGEKFDPKGEYTRCFLPELK
DLPDKYLYRPWEAPPEVLRKANVTLGDTYPHPVVQIKESRLRALEAYSLTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttagcctcccccattaccatcatgtggtttcgccaagacttgcgcctgcaaaat
aacccagcccttagcgctgcgtttacagcaagtaatgtgctgcctatttatatacttgat
gatgaaacagcaggccaacatcgcatgggggcagctagcagatggtggttacaccattca
ttaaccaagcttgatgcctcactaggcaatgcacttaatgtatatagtggcaacgccgcc
atgattattgaagacttgtgtcaacgttttgatgtggaagcggttttttggaatcgttgt
tacgaaccccataacatcgaacaaactaagcacataaaaatacaactatctgccttagat
attaaggccaatagcatcaacggctcgttactgaacgagccttggtctgtatttaaaaaa
gatggcagcccatacaaaatctttaccccatatcatcgtgaagcatgcaaagtagatcag
cctaccgcccttttgccagcgcctgttttgccacaaaccgtggtggttgatccaaaagcc
acagatttagaaagcctctcgttgttaccaaagataaaatgggacacttcgttttatgag
caatggacaccgggagaagaaggtgcttttttggcacttaatcgctttttggcagacggc
atcaataattacaaagaaggcagagacagacctgcattaaagtctttttctagcctatcc
ccgcacctgcattttggtgacatttcacctgatcagatcattaatgccttgcttactgta
gaagatgatcaaaacagtgaacactttaaaaaagaaatccgttggcgtgaattttcttat
tatttattgtttcactttccaggtttgccagagcaaaatttaaaaccaaattttgacaaa
ttcccatgggaaaataaccctaattatttaaagtgctggcaacaaggccttacaggctat
cccttagtggatgcgggcatgcgcgaactttggcaaacaggctatatgcataaccgtgtg
cgcatggtaacagcatcctttttgatcaaaaacttattggtagactggcgcctaggtgct
agctggttttgggattgcttagtagatgcagacttagctagcaatagtgcaagctggcaa
tgggttgcaggctgtggcactgatgcctcaccttactttcgagtatttaaccctattact
cagggcgaaaaatttgatcccaaaggtgaatacacaaggtgctttttaccggagctaaaa
gacctgcccgacaaatacctatatagaccttgggaagcgcctccagaggtgcttcgtaag
gccaatgtcaccttgggcgacacttacccacaccctgttgtgcagatcaaagaatcacga
ctaagagccctagaggcctatagtttaacgagaggctaa
DBGET
integrated database retrieval system
