Candidatus Njordibacter sp. Uisw_002: ABXT42_02930
Help
Entry
ABXT42_02930 CDS
T11338
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABXT42_02930 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_02930 (recB)
Enzymes [BR:
njo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABXT42_02930 (recB)
DNA repair and recombination proteins [BR:
njo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABXT42_02930 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOJ99924
LinkDB
All DBs
Position
604131..607634
Genome browser
AA seq
1167 aa
AA seq
DB search
MPNLDLVNLPLQGRHLIEASAGTGKTYSITRIYLRLLLEKQIPVEQILLMTYTRAATQEL
RGRIEETLRDAQSNWGKHKDEFWQHLYQHTQAKQAQLLLHQALLNLDQAAIFTIHGFCGR
ALEQHAFASQTGLEVVLEANTQDLAFTALQDWLRVAMHQPKLYSQLEQQGWHTPKGFWDA
FSGALLSQTPVFCASADAWHKAWHANKIQVRESLLDLEEQMIQATMSDPKTKEAKLAQWQ
GLINWLGTVDFAQAHKDHLLCLHGGKLGKVPELKPVIKALSVRINNESFKKNYAANAQQC
VLAPDILIAVNTVRKAYQKAKHKQQVMEFDDLVRRLSECVIKPENAALVDALRIAYPVAL
VDEFQDTDGHQYAILNRLYEAQGNTALFMIGDPKQAIYGFRGGDIHTYLHAAQSTDYRWH
MDTNWRSSHAMVAAYNRLFLKAHEHNLLGPGIDYSAVKASAFATANQDQNPKASGVALSY
VWLPTQVLTNEHKYQHIANWCVGQVQTILHQGHFKACDIALLVRGAGEAQALQKALQKAQ
LPSVYISDRSSVYKSEQAIEMLRLLNGILHCEDQRQLVRAASTQLWGGNVPLLAKLSSSD
SYLIEVRSQMMQMRKLWLQQGAMVLIIRLLKQRAVPPAQNKERYLTNMVQLAELLQKASN
QASSALLLVEWLQQQCDSDQADASAELRLESDAKLIQIVTQHGSKGLEYPVVFIPFASQA
KDPLKRGKKKSQLFSYYHPKEHCQALMIGPDPSICEQTAQAAYEESLRLLYVAITRAQYQ
CYIPVSNFPNSQLSPLGQVVFGACDNNNLPSWPEALVPLTHATDSQVLCVDEDELQRSMS
VPTVEALVKDELQAQVLTTQNFTGHIDANNHLLSYSALVRKLGYGSVPPQSSVKDRGDGS
TALVEPSQTIKSQALRFTLAKGKNSGLLLHDILEQVDFAQPNWVHAMEVPLAKYHTMVGI
GADDTDKMARLQQWLEECLLTHLPALGTQEDTGSQSQSNCSLGQLLAQQTLRETEFYFPL
QHAKQATLANILSAHRSGAPTALPTHPVLHGMMHGFIDLVFEHDGRFFVADYKSNHLGDN
FADYNHQAMLESNQNHYYDLQYLIYSLALHRYLGQRLPNYSPQQHFGGVYYLYLRGMSPH
SDTGVFAQAITTDELNQLDQLFAGDVK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacctagacttagtaaatttaccactccaaggtcgccaccttattgaagcaagt
gcgggcactggtaaaacctatagcattacgcggatatatttgcgtttgctgctagaaaaa
caaatccctgtagagcaaatattgctaatgacgtacacccgtgcagccacgcaagagttg
cgcggccgtatagaagaaaccttgcgtgatgcgcagagtaattggggcaagcataaagat
gaattttggcagcacctctaccaacacacccaagcgaaacaagctcaattgttgttgcac
caagccctactcaatttagatcaagcggccatatttaccatccatggcttttgtgggcgt
gccctagaacaacatgcctttgctagtcagacagggctagaggtagtgcttgaggctaac
acacaagacttagcctttactgcactgcaagactggctgcgggtggctatgcaccagcct
aagctatatagccagctagagcagcaaggctggcacacacctaaaggtttttgggacgca
tttagtggggctctattaagccaaacacctgtgttttgcgcttctgcggacgcttggcat
aaagcttggcacgccaataaaatacaagtgcgtgaaagcttgcttgatttagaagagcaa
atgatccaagccaccatgtcagaccctaaaacaaaagaggcaaaactggcccagtggcaa
ggtttaattaattggcttggcactgttgattttgcccaagcgcacaaagaccatttgctc
tgcttacacgggggtaaacttggcaaagtgccagagctaaaacctgtcattaaagcttta
tctgtgcgtataaataatgaaagctttaagaaaaactatgctgccaatgcacagcaatgt
gtattggcaccagacattttgatagccgtaaatacggtaagaaaagcctatcaaaaagca
aaacacaagcaacaggttatggagtttgatgatctggtaaggcgtttgtctgaatgtgtg
ataaagcctgaaaatgcagcccttgtagatgcactgcgcattgcttatcccgtggcttta
gtggatgagtttcaggatactgatgggcatcaatacgctattttaaatcgcctatatgaa
gcgcaaggtaatactgcactatttatgattggtgacccaaaacaagctatatatggcttt
aggggcggcgatatacatacttacttacacgccgcacaatctaccgattaccgctggcat
atggacactaactggcgctctagccatgccatggtagccgcttataatcgtttattttta
aaggcccatgagcataacctattaggcccaggcatcgactacagtgctgtaaaagccagt
gcttttgccacagcaaatcaagatcaaaaccctaaagccagtggggtggctttgtcgtac
gtttggttgcctacacaagtgcttaccaatgaacacaagtaccaacacatcgcaaactgg
tgtgtggggcaagtgcaaactattttacaccaagggcattttaaagcctgcgatattgct
ttgttagtgcgcggggcaggcgaagctcaagccttgcaaaaagccttgcaaaaagcccag
ttaccaagcgtttatattagcgatagaagtagcgtgtataaaagtgagcaagctattgaa
atgctgcggttacttaatggaatactgcactgtgaagaccaaaggcagcttgtacgtgcc
gctagtacgcagttatggggtggcaatgtgcccttgttggctaagctttcatccagtgac
agctatttaatagaagtaagaagccaaatgatgcaaatgcgcaaactatggctgcaacaa
ggcgccatggtgcttattattaggctgctaaagcaacgtgccgtgccgcctgcccaaaat
aaagaacgctatctaaccaacatggtgcaattggcagagctattacaaaaggcatcaaat
caggcaagctctgcattattgctggtggaatggttgcaacagcagtgtgatagcgaccaa
gcagatgctagtgctgaattaaggctagaaagcgatgccaagttgatccaaattgttacc
cagcatggctctaaaggcctggaatacccagtggtatttataccgtttgctagccaagca
aaagatcctctaaaacgaggcaagaaaaagtctcagctattctcttactatcatccaaaa
gagcactgccaagcattgatgatagggccagacccttcgatatgtgagcaaaccgctcaa
gctgcctatgaagaatcattaaggttgttatatgtggcgattacacgtgctcaatatcag
tgttacattccagtaagtaacttccctaacagccagttgtcgcctttggggcaagtggtt
tttggagcttgtgataataataacttacctagctggcctgaagctttggtgccactaacc
catgccacagactcacaagtgctatgtgtagatgaagatgagctgcaaaggtctatgtct
gtgcctactgttgaagctttagtgaaagatgaattacaagcacaggtattaaccacacaa
aattttaccggacacattgatgcaaataaccacttgttatcttacagtgccttggtgcga
aagcttggctatggctctgtgccaccacaaagtagcgtgaaagaccggggagatggcagc
actgccttagttgagccttcacaaaccataaaatcgcaggcattacgctttactctagca
aagggtaaaaatagtggtttgttgttgcatgacattttagaacaggtagattttgctcag
ccaaattgggttcatgccatggaagtgcctttggccaaatatcacactatggtaggtata
ggcgcagatgatactgacaagatggcgcgtttgcagcagtggttagaggaatgtttgtta
actcacttgccagcccttggcacacaagaagacacaggctcacaatcgcaaagtaattgc
agcttggggcagctgttagcccagcaaacattaagggaaactgagttttacttcccctta
cagcatgctaagcaagcaaccttagcaaatattttaagcgcacatagatcaggtgcacct
actgcattacctactcaccctgtgttacatggcatgatgcatggttttatagatttggtg
tttgaacatgacggacgattttttgtagccgattacaaatctaaccatttaggtgacaac
tttgcagactacaatcaccaagccatgctggagtccaatcaaaaccactattatgacctg
caatatttaatatatagcctagccctgcaccgatacctaggccaaagattgccaaactat
agcccgcagcagcactttggtggggtatattatttataccttagaggcatgtcaccccat
agtgatacaggtgtatttgctcaggcaattactacagatgagcttaatcagctggatcaa
ttgtttgcaggagatgtcaaatga
DBGET
integrated database retrieval system
