Candidatus Njordibacter sp. Uisw_002: ABXT42_02935
Help
Entry
ABXT42_02935 CDS
T11338
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABXT42_02935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_02935
Enzymes [BR:
njo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABXT42_02935
DNA repair and recombination proteins [BR:
njo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABXT42_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
RecD_N
AAA_22
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
Herpes_Helicase
NPHP3_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
XOJ99925
LinkDB
All DBs
Position
607631..609394
Genome browser
AA seq
587 aa
AA seq
DB search
MMVSKEQLHNNYTGLEAVDVFLAKGLCESLNSQNDVMQHLIMALSKALRSGHTCLPLADI
AGQTYWSSLVDLRVDSRPDVGPDEVIDEKIGYTFGAFEELVNCVQDHPITPSHTAPLVFE
YERLYLRRYWHYEQQVAKQLLNRMRKCELTPQQEVIADEVLSQLFAKQAQVDWQAQAVKD
AFGRQLSVVSGGPGTGKTYTVARLLVALQAVSDTPLTIAMAAPTGKAKQRLVESINAAKA
QLLNQGINKTLINSLPDTAHTLHGLLGVRPNTHVTKHHQDNTLPIDLLLVDEVSMVDLPM
MARLLAALPSHCKLVLVGDAQQLPSVAAGSILADIPPSFISYLHKSHRFDGQGGISLLAT
QVMHNQAQESFEVLADHKDLHLITDEHFELWLAQMCDEYFMPMLKAPSLDEAFECLNQFR
ILAATRQGDLGVEGLNEHVERLLSRRLSQVRLGQNYHGKPVMVTKNHHGLGLFNGDVGIM
WAQEDGQLNACFLQSQIVRKVNVGLLQDLETVYAMTIHKTQGSEFAHVALIVAPQAQRLL
SSALLYTAITRAKVTCSIKVDQSVWNKAVNNKTRRWSGLRGLLNGHV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttcaaaagaacagctgcataataattacactggtttagaagcggtggatgtg
tttttagccaagggcttatgtgaaagcttaaacagccaaaatgatgtgatgcaacatttg
atcatggccttaagtaaagccttgcgaagtggccacacttgcctgcctttagctgatata
gcaggacaaacctattggtcttccttggttgatctaagggttgattctaggcctgatgtg
ggacctgatgaagtgatcgacgaaaagataggttatacatttggtgcatttgaagaactg
gtgaattgtgttcaagatcatcccattactccaagccataccgcacctttggtatttgaa
tatgaacgtttgtatttgcgcagatattggcactatgaacagcaggttgcaaaacagtta
ttaaatcggatgcgcaagtgtgaactaacaccacaacaagaggtgattgctgatgaagtg
ttatcacaactttttgctaaacaggcccaagtagactggcaagcccaagcagtcaaagat
gcatttgggcgccagttaagtgtggtgtctggtggcccaggcacaggtaaaacctatact
gttgctcgtcttttagtggctttacaagccgtaagtgatacccctttaaccattgccatg
gcggccccaacaggtaaagcaaagcagcgcttagtggagtctattaatgccgccaaagcg
caattattaaaccaaggcatcaataaaacactcatcaatagcctcccagacactgcccat
acgctacatggcttgttgggagtgcgccctaatacacacgttactaagcaccatcaggat
aatactttacccattgatctattgctggtggatgaagtttccatggtggatttgcctatg
atggcgcgcttgttagcagcccttcctagtcattgtaagctagtattggtgggagatgcg
cagcagttaccttctgtggcagcaggttctattttggctgatatacctccaagctttatc
agctacttacataaaagccatcggtttgatggccaaggtggtattagtttattagcaact
caggtcatgcataatcaagcccaagaaagctttgaagtgttggcagaccataaagacttg
cacttgatcacagatgaacactttgaactgtggcttgcacaaatgtgtgatgaatatttt
atgcctatgctcaaagcaccttcattggatgaagcctttgagtgtttaaatcaatttaga
atcctagccgcaacccgccaaggagacttaggtgtagaaggccttaatgaacacgtagag
cgcttgcttagcaggcgcttgtctcaagttaggttggggcaaaactatcatgggaaacct
gtgatggtgactaaaaaccaccatgggctgggtttgttcaatggtgatgttggcattatg
tgggcgcaagaagatggccagctaaatgcctgttttttacagtctcaaatagtgcgcaaa
gtaaacgtgggcttattacaagatttagaaactgtgtatgccatgaccattcataaaacc
caaggctcagagtttgctcacgtggcgcttattgttgctccccaagcccagcgattgttg
tcttctgcgttactttataccgccatcactcgtgccaaggtaacgtgcagtattaaagta
gaccaatcggtgtggaacaaagctgtgaacaataaaactaggcgttggtctggcctgcgt
gggcttttaaatgggcacgtttaa
DBGET
integrated database retrieval system
