Candidatus Njordibacter sp. Uisw_002: ABXT42_03405
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Entry
ABXT42_03405 CDS
T11338
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo00470
D-Amino acid metabolism
njo00550
Peptidoglycan biosynthesis
njo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABXT42_03405 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABXT42_03405 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
njo01011
]
ABXT42_03405 (murD)
Enzymes [BR:
njo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABXT42_03405 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
njo01011
]
Precursor biosynthesis
Amino acid ligase
ABXT42_03405 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
NAD_binding_8
TrkA_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
XOK00014
LinkDB
All DBs
Position
694267..695622
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AA seq
451 aa
AA seq
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MPLIVSDRYSLIIGLGVTGFSCAQYLARQGERFCVVDSRQDPPFLQQLKSEQPNTLIHLG
EFALDLCLNASQIILSPGVSLQEPVLVEAAKAGVPIRSDIDLFAQAARKACVPIVAITGS
NAKSTVTSLVGEMAKMANLNVAIGGNLGQPSVSLLADNIDLYVMELSSFQLESTTGLGAS
VACVLNVSADHMDRYNNLMGYHQAKHRIFQACKAVVVNGNDALTNPLVPDTVTQTRFSLG
EPDVGQFGVLTKHGEKWLAKGMYCIMPVKKMALKGGHNIANGLAALALGEAAGLPMDAMV
STLTTFTGLPHRCEHVANIDGVSYINDSKGTNVGATVAAIEGLGPELKGKIILIAGGEGK
GADFSDLAAPVSKFCKQTLLIGADAQRIKQVLFDSSIFFDAKDMQTAVSIAHENAVSGDL
VLLSPACASFDAYDNFESRGLHFSQLVRALI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccattgatcgttagtgatcgttacagccttattatcggtttaggagtcactgggttt
tcttgtgctcaatatttagcccgtcaaggtgagcgattctgcgtggttgactctaggcaa
gatcctccatttttgcagcaattaaaatcagagcagccaaacacgctgatacacttaggt
gaatttgctcttgatttatgccttaacgcaagccaaatcattttaagtcctggggtatcc
ttacaagagcctgttttagttgaagcagccaaggccggcgtgcctattcgcagtgatatt
gacctatttgcacaggcagcccgtaaagcttgtgtgccaattgtggcaataactgggtct
aatgctaaaagtacggtcacaagcttggtgggtgaaatggctaaaatggccaatctcaat
gtagctattggcggtaatcttggtcagccctcggtgtcattgttagctgataatattgac
ctatatgtgatggaattatcaagttttcagttggaatctactactggcttaggcgcaagt
gttgcttgtgtgcttaatgtgagcgcagaccacatggatcgctataataaccttatgggc
taccatcaagctaagcatagaatttttcaggcatgtaaagctgtggtagttaatggtaat
gacgcccttactaatcctcttgtgccagataccgttactcaaacacgctttagtctgggt
gaaccagatgtagggcaatttggtgtacttacaaagcatggtgaaaaatggcttgctaaa
ggtatgtactgcattatgccagttaaaaaaatggcattaaaaggtggccataatatagct
aatggccttgcagctttggctcttggcgaagcagcaggtctgccaatggatgcaatggtt
agcaccctaacaacttttacaggcttgccccatcgctgcgagcatgtggctaacatcgat
ggcgtgtcatacatcaatgactctaaaggtactaatgttggggcaactgtggctgctata
gaaggcctagggcctgagttaaaagggaaaataatactgatcgcaggtggggagggtaaa
ggtgcagacttttctgacttagctgcgccagtatcaaagttttgtaaacaaactctttta
ataggtgcagatgcacaaagaattaaacaagtcttatttgatagctctatcttctttgat
gcaaaagatatgcaaacggcagtgtcaattgcacacgaaaatgcagtcagtggtgattta
gtattattatctccagcatgcgcaagttttgatgcttatgataattttgagtcaagaggc
ctacatttttcccaactggtgagggcgttgatatga
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