Candidatus Njordibacter sp. Uisw_002: ABXT42_04040
Help
Entry
ABXT42_04040 CDS
T11338
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXT42_04040 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
njo03019
]
ABXT42_04040 (groL)
03110 Chaperones and folding catalysts [BR:
njo03110
]
ABXT42_04040 (groL)
03029 Mitochondrial biogenesis [BR:
njo03029
]
ABXT42_04040 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
njo04147
]
ABXT42_04040 (groL)
Enzymes [BR:
njo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABXT42_04040 (groL)
Messenger RNA biogenesis [BR:
njo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABXT42_04040 (groL)
Chaperones and folding catalysts [BR:
njo03110
]
Heat shock proteins
HSP60 / Chaperonin
ABXT42_04040 (groL)
Mitochondrial biogenesis [BR:
njo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABXT42_04040 (groL)
Exosome [BR:
njo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABXT42_04040 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABXT42_04040 (groL)
Exosomal proteins of breast cancer cells
ABXT42_04040 (groL)
Exosomal proteins of colorectal cancer cells
ABXT42_04040 (groL)
Exosomal proteins of bladder cancer cells
ABXT42_04040 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
XOK00130
LinkDB
All DBs
Position
847867..849513
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFGDSARSRMVNGVNILADAVKVTLGPKGRNVVLDKAFGSPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASQANDVAGDGTTTATVLAQAILNEGLKAVAAGMNPMDLKRGI
DKASAAVVAQIEAMATPCADTNAIAQVGTISANSDATVGMIIAEAMEKVGKEGVITVEEG
TSLQDELDVVEGMQFDRGYLSPYFVNNQDNMTAELETPFLLLVDKKISNIRDLLPILEAV
AKSGRPLLIVAEDVEGEALATLVVNNMRGIVKVCAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEEIGLSLETATLEQLGQAKRVTMSKENTIIIDGIGEAAAIEGRVNAIRAQIGDTSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGVALV
RALQGIQDLEGANPDQTVGIKVALKAMEAPMRQIATNSGDEASVVVDKVKSGSGNYGYNA
STGDYGDMIEMGILDPAKVTRTALQAAASVAGMMLTTECMIADAPSEEGAGGGMPDMGGM
GGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtaagatttggtgattcggctcgtagccgtatggtaaacggcgta
aacattttagccgatgctgtaaaagtaaccttaggccctaaaggccgtaacgtagtttta
gacaaagcctttggctctccaaccatcactaaagatggcgtgtctgtagctaaagaaatc
gaattggcagacaaattcgaaaacatgggcgcacaaatggtgaaggaagttgcttcacaa
gccaacgatgtagctggtgacggcaccactactgctactgttttggctcaagcgatccta
aacgaaggccttaaagctgttgcagcgggcatgaacccaatggatcttaagcgcggcatc
gacaaagcttctgctgctgttgtagcgcaaatcgaagccatggctacgccttgtgcagac
accaacgctatcgctcaagtaggcactatttctgctaactctgacgccactgtgggtatg
atcattgctgaagcgatggaaaaagtaggcaaagaaggcgtgatcacagtagaagaaggc
acttctctacaagacgagctagatgttgtagaaggcatgcagtttgaccgtggttacttg
tctccttactttgtaaacaaccaagacaacatgactgctgaattggaaacacctttcctt
ttgttagtagataagaagatttcaaacattcgtgacttgctacctattttggaagccgtt
gcaaaatctggtcgtccactattgatcgtggctgaagatgttgaaggcgaagccttggct
actttggtagtaaacaacatgcgcggcattgttaaagtatgtgctgttaaggcaccaggc
tttggcgatcgtcgtaaagcgatgctagaagatatcgctgtattgactggcggtactgta
atttctgaagaaattggtttgtctctagaaactgctactctagagcagcttggtcaagct
aagcgtgtgactatgtctaaagaaaacaccatcatcatcgacggtatcggtgaagctgct
gcaatcgaaggccgtgtaaacgctattcgtgcacaaattggtgatacttcttcagattac
gatcgtgagaagctacaagagcgtgttgctaagcttgcaggcggcgttgccgtaatcaag
gttggtgctgctactgaagtagaaatgaaagagaagaaagctcgcgtagaagacgcattg
cactctactcgtgctgctgttgaagaaggcgtagtaccaggaggcggtgttgctctagta
cgtgctcttcaaggtattcaagacctagaaggtgctaacccagatcaaactgtaggtatt
aaagttgcccttaaggcaatggaagctcctatgcgtcaaattgcaactaactcaggtgat
gaagcctctgtagtggtagacaaggttaagtctggttctggtaactatggctacaacgct
agcactggtgactacggcgacatgatcgaaatgggtatcctagatccagccaaagtaact
cgtactgcgcttcaagctgcagcttctgtagctggcatgatgctaaccacagaatgcatg
attgctgatgcaccttcagaagaaggcgctggtggcggtatgcctgatatgggcggcatg
ggcggtggcatgggcggcatgatgtaa
DBGET
integrated database retrieval system
