Candidatus Njordibacter sp. Uisw_002: ABXT42_04740
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Entry
ABXT42_04740 CDS
T11338
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03030
DNA replication
njo03430
Mismatch repair
njo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABXT42_04740
03430 Mismatch repair
ABXT42_04740
03440 Homologous recombination
ABXT42_04740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
njo03032
]
ABXT42_04740
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_04740
Enzymes [BR:
njo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABXT42_04740
DNA replication proteins [BR:
njo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABXT42_04740
DNA repair and recombination proteins [BR:
njo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABXT42_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XOK00265
LinkDB
All DBs
Position
993537..994163
Genome browser
AA seq
208 aa
AA seq
DB search
MIKRRLRRIKDVWRVRQLKSSWMYLFHHYQGEELVSLDIETTSLDVSKAQILSIAAVVIK
GNRVMSSNKLSVTLAPPKELPKASVKIHKLRRMDLNEGLPVEEALKKMLQFIGNRPIVGY
NIAYDLAVLDKHLRPLYEFGVPNPCVDVMDLYRNKARLSGGAEYQINLSFEAIAKTLDVP
ILGRHTALGDAITTAIMYVRLKSSASLF
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacgtagattgcggcgcatcaaagatgtctggagggtgcgtcagcttaaaagc
tcatggatgtacctttttcatcactatcaaggagaagagctagtctctttggatatagag
actacaagcttagatgtttctaaagcgcaaatattatccatagcagcagtggtgattaag
ggtaaccgtgtaatgagtagcaataagctatcggttactttggccccgcctaaagagcta
cccaaggcttcagtgaaaatccataaactgcgacgtatggatctaaatgaaggcttacct
gtagaggaggcattgaaaaaaatgcttcaattcataggtaatcgtcctattgttggatac
aacatcgcatatgatctagccgtattggataagcacttaaggccgttatacgaatttggg
gtgccaaatccttgtgtggatgtgatggatttgtaccgtaataaggcgcgcctatctggc
ggcgctgaatatcaaatcaatttgtcttttgaagctatagccaaaacactagacgtgcct
atactaggtcgccacacagctttgggcgatgctattactacagctattatgtatgtacgt
ttaaaatcgtcagctagcctcttctaa
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