Candidatus Njordibacter sp. Uisw_002: ABXT42_04790
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Entry
ABXT42_04790 CDS
T11338
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
njo Candidatus Njordibacter sp. Uisw_002
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
njo03036
]
ABXT42_04790 (smc)
Chromosome and associated proteins [BR:
njo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
ABXT42_04790 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
Cas_Csm6_HEPN
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XOK00274
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Position
1001323..1004850
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AA seq
1175 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTKVNLPGNLCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGEN
STDVIFNGSTSRNPVGQSTVELIFDNQDRTLAGEFASYNEVSIRRKVTREGQSTYFLNGQ
KCRRRDVTDLFLGTGLGPRSYSIIEQGTISRLIESRPEELRVYIEEAAGISRYKERRRDT
SNRISRTRENLSRLQDITDELSRQLDTLKQQAESAEKYTQLKQSERQFKSQLATLQWREL
SQKLGAQSIIIKNFEEQIILQRSEQDVRFSQIDVQKNDLVVLNENFGQLQGEFYSLGAKI
ARIEQSIEHNQMQQKRWFEDVSEATLQLGRIDEAYATDNKELEHLTQQSQQLALNVELAC
EQLLEAEQNLQGSHESHQHGQMLWQEKNEEQGRLKGLIDVAKTGLKLTQQQSEQAHQDHQ
ECLMQLQNLNLPNVEDAKLLSEQIDHQQEQQHNLTEQILSQEGALQLSRQHERDYQQRLD
VQVQELGVLAGQISSLQLLMSEAEQEAVLLPAKWQTDECAKLIDTMSVESGWEPAVEHVL
RDWLGSYLMPQSEHLSQNDLFDVKGLALIVPLGSQSFTKLENAWPILLGKIGKLDAPLEL
RGLLEHVYLANNELEAKKILSNLPIYCSVILPSGLWLGHGWIRTPPREDSRAGILGRKQQ
VQTLSVTQKSLRELQQNTQQELALEREEALTLEQSLSEMRQKWRLTQNSLQQQQQKSALL
QQQSQQFLMQQKGLQHRVEEQSKRLEQLGKELVLLQEELNERQLMLESLQLDMPGLEIEK
ESLEVSLGQARLEFSHKQQQVFQIQTKMSSVSAQMHSLGRSTERMQEQRAQWSEKQAQLQ
ASEISARDTNEGAHESLTGQLDTALTLRVDAEAGMEKRRHEISQLEHLIRQLEQQQLKQE
HEIQSTDSRLQEQRLIERELEVNADNIKQAMLAENVRVEKFAKTLPDQVNAQELSYLLEQ
CQNRIKRLGAINLVAIEEYKTQQDRKVFLDQQHDELIEALESLEQAIAKIDKETKARFKK
TFDTVNEHLNNLFPKVFGGGRASLELTDDDMLATGVTIMAQPPGKRNSSIHLLSGGEKAL
TAIALVFSIFQLNPSPFCMLDEVDAPLDDANVERYAKLVKEMSSQVQFIYISHNKIAMEM
ATQLLGVTMQEAGVSRLVTVDIAQAINMTEQSLVV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaaagagcatcaagttagctggttttaaatcattcgttgatcccactaaagtc
aacttaccaggcaatttatgtgctgtagttggccccaatggttgtggaaaatctaacatt
attgatgctgtacgttgggttatgggagaaagttctgccaaaaacctacgtggtgaaaat
tctacagatgttatttttaatggatccaccagccgcaatcctgtggggcagtccactgtt
gaactcatatttgacaaccaagaccgaactttagctggtgaatttgcaagctataatgaa
gtctcgattcgccgcaaagtcactcgtgaaggtcagtctacttattttttgaatggtcaa
aagtgtcgccgaagggatgtcacagatttatttttaggtacggggttagggcctcgtagt
tattctattattgaacaaggcaccatctctcgcctaatcgaatcgcgccctgaagagctg
cgcgtctatatagaagaagctgctggtatttcacgttataaagaaagaaggcgagatacc
tctaaccgaattagccgcacccgtgaaaatttatcccgcctgcaagacatcacagatgaa
cttagcagacagttagataccctcaaacagcaagctgagtcagcagaaaaatatacccaa
ttaaagcaaagcgaacgtcagtttaagtctcaacttgctactctacaatggcgtgagtta
agtcaaaaattgggtgctcaaagtattattattaaaaattttgaagagcaaattattttg
caacgtagtgaacaagacgtacgtttttcacaaatagatgtgcaaaaaaatgacttggtg
gtgcttaatgaaaactttgggcagctgcagggcgagttctatagtttgggtgcaaaaatt
gcgcgtatagagcagtctattgaacacaatcaaatgcaacaaaagcgttggtttgaagat
gtatcagaagccacgttgcagcttgggcgtatagacgaagcgtacgctacggacaacaaa
gaactagagcacctgactcagcaaagccagcagcttgctttaaatgttgagctagcttgt
gagcaattacttgaagctgagcaaaatttacaaggtagccatgaaagtcatcaacatgga
caaatgttgtggcaggaaaaaaatgaagagcaggggcggcttaaaggccttattgatgtt
gcgaaaacgggactaaagctgacacaacaacaaagtgagcaggcgcatcaggaccatcaa
gaatgtttgatgcaactgcaaaatctaaacttgccaaatgttgaggatgcaaagctttta
agtgagcaaattgaccatcaacaagagcaacagcacaacttgactgagcaaatattaagc
caagaaggtgcattacaattatcaaggcagcacgaacgagattaccaacagcgcctagat
gttcaagtgcaagagctaggtgttttagctggtcagatttcatctttgcagttacttatg
tcagaagctgaacaggaggcggtgttattgccagctaaatggcaaactgatgagtgtgca
aagctcattgatacaatgtctgtggagtctggttgggaacctgctgtagagcacgtctta
cgcgactggttgggtagttatctaatgcctcagtcagaacatttaagccagaatgacttg
tttgatgtaaaaggtttagcactgattgtgcctttgggcagtcaatcgtttaccaagtta
gagaatgcctggcctattttgcttggaaaaattggcaagcttgatgcgcctcttgagcta
agggggttgctagaacacgtttatttagccaataatgaacttgaagctaaaaaaatatta
tcaaatctgcccatttattgtagtgtcattttgccaagcggattatggcttggccatgga
tggattcgcacgcctccaagagaagacagccgcgcaggcattttagggcgtaaacagcag
gttcaaactttgtcagtaacgcaaaaatcattacgtgagttgcagcaaaatacacaacaa
gagttagcgttagagcgtgaagaagcgctaacgctagagcagtctttaagtgaaatgcgc
caaaaatggcgacttacccaaaacagtcttcagcagcagcaacaaaaatcagcattattg
cagcagcaaagtcagcagtttttaatgcagcaaaaaggccttcaacatcgtgttgaggag
caatccaaacggcttgagcaattaggaaaagagctggtgttgttacaggaggagctgaat
gagcgccaactgatgcttgaaagtttgcaattagacatgcctgggttagaaattgaaaaa
gaatcgctagaagtaagcttaggccaagcaagattagaatttagccataagcaacaacag
gtttttcagatccaaactaaaatgagcagcgtgtctgcccaaatgcatagtttgggcaga
tcaactgagcgcatgcaagaacaacgggctcagtggagtgagaagcaagcgcagttgcag
gccagtgaaatcagtgctagagatactaatgagggcgcccacgaaagccttacaggtcaa
cttgatacagctcttacccttagggtagatgctgaggcagggatggagaaaaggcgtcac
gaaattagtcagttggagcatttaatcaggcagttggagcaacaacaacttaagcaagag
catgagattcaaagcactgattcacgtttgcaggaacaacgtttaatagagcgtgagctt
gaagtgaatgcagataatattaagcaagctatgctggctgaaaatgttcgagtagaaaag
tttgcgaaaactctgcctgatcaagttaatgcacaagaattaagttatttattagagcag
tgtcaaaaccgtattaagcgtctaggggcaattaacttagtcgccattgaagagtataaa
acgcaacaagatcgaaaagtatttcttgatcaacaacatgatgaacttattgaagcctta
gagagcctagagcaagctattgcaaaaattgataaagaaactaaggctagatttaagaaa
acgtttgatacagtcaacgagcatttaaataatttatttccaaaagtttttggtggtgga
cgcgcttctttggagttaacagatgatgatatgttagccacgggcgtaactataatggct
cagcctccaggtaagagaaatagtagtattcatctgctatcaggtggagaaaaagcttta
acagccattgcgttagtgttttcaattttccagcttaacccttcacctttttgtatgcta
gatgaagtggatgcgccgcttgatgatgccaacgtagagcgctatgcaaaactagtaaaa
gaaatgtcatcccaggtgcagtttatttatattagtcataataaaatagcaatggaaatg
gcaactcagttactaggtgtcactatgcaagaagctggtgtatctaggcttgtgacagta
gatattgcccaggccatcaatatgacagaacaaagcttggtcgtttaa
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