Candidatus Njordibacter sp. Uisw_002: ABXT42_05290
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Entry
ABXT42_05290 CDS
T11338
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo00541
Biosynthesis of various nucleotide sugars
njo01100
Metabolic pathways
njo01250
Biosynthesis of nucleotide sugars
Module
njo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABXT42_05290 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
njo01005
]
ABXT42_05290 (kdsB)
Enzymes [BR:
njo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
ABXT42_05290 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
njo01005
]
Lipid A
ABXT42_05290 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Terminase_7
DUF2064
Motif
Other DBs
NCBI-ProteinID:
XOK00373
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Position
1110727..1111500
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AA seq
257 aa
AA seq
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MSFSVVIPARFQSSRLPGKPLLDLGGMSMLQRVYQQACKSGASQIYIATDHSDIQTHAKL
FCDQVIMTSENHATGTDRLQEVVTKLALPEDHIVVNVQGDEPLIPPTLINQVAHNLQRYS
NASIATLAEQINDVEQVFDTNAVKLVRNGANMAMYFSRAPLPWNRSWNETDSKSLTRDVY
LRHIGLYAYRVSFLHRYVTWPQASYESLESLEQLRALHHGESIHVDLAPQGMPGGVDTPD
DLIRMRKLLASMPMGNG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttctgtagtcattccagcaaggtttcaatccagtcgcttaccaggtaagccg
cttttggatcttggaggaatgagtatgcttcaaagggtttatcaacaggcctgtaaaagt
ggcgcatcgcaaatttatattgcaacagatcatagcgacattcaaacgcacgcaaagctc
ttttgcgaccaagttattatgaccagtgagaatcatgccacaggtactgataggctgcag
gaagtggtcacgaagcttgccttacccgaagatcatattgttgttaacgtgcaaggggat
gagccattaatccctcctacattaattaaccaagttgcacataatttacagcgttactct
aatgcgtccattgctactttggccgagcagattaatgatgtagagcaggtgtttgatact
aatgctgtgaagctagtgcgcaatggcgctaacatggcaatgtacttctctcgtgctccg
ttaccttggaatcgcagttggaatgagactgatagtaaatcgctaactagggatgtttat
ctacgacacataggcctttacgcctatcgtgtgagctttcttcaccgttatgtgacatgg
cctcaggcaagttatgagtctcttgaaagtcttgagcaacttagagcattacaccatggt
gagagcatacatgttgatttagcgccacaaggtatgccaggtggcgtagatactcctgac
gatctaatacgtatgcgtaaattactggcatcaatgcctatgggaaatggatga
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