Candidatus Njordibacter sp. Uisw_002: ABXT42_05775
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Entry
ABXT42_05775 CDS
T11338
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03030
DNA replication
njo03430
Mismatch repair
njo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABXT42_05775 (dnaQ)
03430 Mismatch repair
ABXT42_05775 (dnaQ)
03440 Homologous recombination
ABXT42_05775 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
njo03032
]
ABXT42_05775 (dnaQ)
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_05775 (dnaQ)
Enzymes [BR:
njo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABXT42_05775 (dnaQ)
DNA replication proteins [BR:
njo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABXT42_05775 (dnaQ)
DNA repair and recombination proteins [BR:
njo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABXT42_05775 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XOK00462
LinkDB
All DBs
Position
1217517..1218248
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AA seq
243 aa
AA seq
DB search
MRLIILDTETTGLEPKQGHRLIEVGALEMVNRRLTGKSFHEYVQPERDVPMEAQAVHGIT
EEFLADKALFSTIADQFIEFITGAELIIHNAPFDLGFLDNELAIAGKMIGKKYPKVSDIC
KITDSLKLARRKHPGQKNNLDALCRRYGIINTHRELHGALLDSEILADVYLMMTGGQTDL
MWAAQATSATGDAVAPASRTVSLEGYELPVVMATDAEVAAHKTKLQTVAKASGDNCLWLS
SMD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattaattatacttgatacagaaacaacaggtttagagcctaaacaaggccatcgt
ttgattgaagttggcgctttagagatggtcaataggcgtcttacagggaaaagtttccat
gaatacgtgcagccagaacgtgatgtgccaatggaagctcaggcggtgcatggcattact
gaagaatttcttgccgataaagcattgttttctaccattgctgaccagtttattgagttc
atcactggtgctgagctaattattcataatgcgccatttgaccttggttttttagacaat
gaattggctattgcaggaaaaatgataggaaaaaaatatccaaaagtttcggatatttgc
aaaataacagactctttaaagcttgctaggcgcaagcaccccggacaaaagaacaatctt
gatgcgctttgtcgacgttatggaattatcaacactcatcgcgaattacatggagcgttg
cttgattctgagattctagctgacgtgtatttgatgatgactggtgggcaaactgattta
atgtgggctgctcaggcaacctccgctaccggagatgctgttgcccccgctagccgtaca
gtgagcttagaaggctatgagctgccagtagtcatggctactgatgcagaagttgctgcg
cataaaactaaactgcaaacagttgccaaggcttcaggtgacaactgtttatggttgtcg
agtatggactaa
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