Candidatus Njordibacter sp. Uisw_002: ABXT42_06195
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Entry
ABXT42_06195 CDS
T11338
Name
(GenBank) FAD-binding domain-containing protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_06195
Enzymes [BR:
njo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABXT42_06195
DNA repair and recombination proteins [BR:
njo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABXT42_06195
Prokaryotic type
ABXT42_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XOJ98328
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Position
1302324..1303853
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AA seq
509 aa
AA seq
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MKETINIVWFKRDLRINDHKPLLVASNSGIPVLPLYVVEPGYWQQGFSSRRHWHFIYDCL
SDLNIALTQLGQPLIVQVGEVCDVITHLHSQYNIQAIYAHEEAGNLWTYRRDVSVNKLCS
TLNIPLHEYPLNGVVRRLSSRDDWSAIRNKRMAQKIAPKPFSLPLLSTYSSHPLPDKDHT
MFGESFVGTVQQGGRIRAVEDLRGFLKHRSSQYLYHISAPGLSSTYCSRLSAHLAWGSLS
VREVVQSIKKRKQQFNAEEKKRFGRNLTAFNSRLAWRCHFIQKIEDQPSIETHCMHPAFE
GLRESQHDEVKFKAWASGHTGYPFVDACMRNLIAHGWITFRMRAMLVSFASYQLWLDWRV
VGHHLAGLFTDYEPGIHYSQLQMQSGVTGINSMRVYNPVKQSMEHDPNGDYIRHWVPELK
GLSNAFIHEPWKWGKNLIDDTSLLSGTVYSTPIVDHESTAKEAKEKLTKVRKSDHFRVIS
NSVYNKLGSRKKRPTKAKKVIAENQLKLF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaccattaacattgtctggtttaaacgcgatctgcgtataaacgatcacaaa
ccgttgcttgtcgcatctaattcaggcataccggtgttgccgctgtatgtggtggagcct
ggttattggcagcaaggctttagctctcgtcgtcattggcatttcatttatgactgccta
tcagaccttaatattgctttaacacaactgggccaacctcttatcgttcaagtgggtgaa
gtttgtgacgtcatcacacacctacattcacaatataatattcaagcgatatacgcacac
gaggaagcggggaatctttggacctatcgtagagacgttagtgttaacaaattatgctct
accttgaatattccactgcatgagtaccctcttaatggcgtagttagaaggctcagttct
cgtgatgattggtcagctattcgcaataagcgtatggctcaaaaaatcgcaccaaaacct
tttagccttcccctactatccacatactcttcacaccctttaccagataaagaccatact
atgtttggcgaaagtttcgtaggcaccgtgcaacaaggcggccgcataagagcagtagag
gatttgagagggtttttaaaacatcgttccagtcaatacctctaccatatttctgcgcca
ggtttgtcgtctacttactgttcgagattatcagcacaccttgcatggggaagtctctct
gtgagagaggttgttcagtcaatcaaaaagcgaaaacagcaatttaacgccgaggaaaaa
aagcgctttggtagaaatttaaccgcatttaactcaagacttgcatggcgctgtcacttt
atacaaaaaattgaagaccaaccctccattgaaactcactgcatgcaccctgcctttgag
ggcttgcgtgagagccagcacgatgaagtgaaatttaaagcttgggcttcagggcatact
ggatacccatttgttgacgcttgcatgcgtaatttgattgcacacggatggatcactttt
cgcatgcgcgcaatgcttgtaagctttgctagctatcagctttggttggattggcgtgtt
gtaggccatcatctagctggtctattcaccgattacgagcctggcattcattatagtcaa
ctgcagatgcaatctggtgttaccggcataaactccatgcgtgtctacaatccagttaag
caatcaatggaacatgatccaaatggcgattatataaggcactgggttcccgagttgaaa
ggcctttccaatgcctttattcacgagccttggaagtggggtaaaaacttaatagatgat
acttcactattatcaggcactgtctactcaacccctattgtcgaccatgaatcaacagca
aaagaagccaaagaaaagctcacaaaggtgcgcaaaagcgaccattttagagtcatctca
aattctgtttataataaactgggaagtagaaaaaaaagaccaactaaagctaaaaaagta
atcgctgaaaaccaactaaagctgttttaa
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