Candidatus Njordibacter sp. Uisw_002: ABXT42_06760
Help
Entry
ABXT42_06760 CDS
T11338
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
njo03016
]
ABXT42_06760 (trmA)
Enzymes [BR:
njo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
ABXT42_06760 (trmA)
Transfer RNA biogenesis [BR:
njo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ABXT42_06760 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_15
Methyltransf_12
MTS
RrnaAD
Methyltransf_11
Methyltransf_23
PrmA
Motif
Other DBs
NCBI-ProteinID:
XOJ98436
LinkDB
All DBs
Position
complement(1409890..1411008)
Genome browser
AA seq
372 aa
AA seq
DB search
MALEPLQPQEYQALLDAKSEHIRSRFDDLGDFATHVELDVLPSKPKHYRMRAEFRMWHEG
DDLYYAMFPPGNKYQPIRIESFPQASERINDLMMPLLEGIKSSLVLSHKLFQIDFLSSQR
GEILVSMLYHKQLGDDWLALADALRIELGINIIGRARKQKHVLGMGYIMETLNIKGRQYH
YQQVENAFTQPNACVNEKMITWACQSIERFGNTDKPDLLELYCGNGNFTVPLAAQFRKVM
ATEIAKSSVNSAHFNLAENNVDNVTIVRLSSEEMTQALAGVRAFRRLADVDLTSFEFGTI
LVDPPRAGLDPDTLRLVQQFDQVIYISCNPETLLDNLQELKQTHDLKRLALFDQFPYTHH
AECGVVLHKRNS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtggcccttgagcctctacaaccgcaagaataccaagcgctattagacgccaaaagtgag
catattcgttctcgttttgacgacttaggagactttgccactcacgttgaattagatgta
ttgccatcaaagcccaaacactatcgtatgcgtgcagaatttcgcatgtggcacgaaggt
gacgatttatattatgccatgtttccacctggcaataagtaccaacctattcgtatagag
tcttttccacaagctagtgagcgtattaatgacctcatgatgcctttgcttgaaggtata
aagtcttcgttggtattaagccataaactgtttcaaatagactttttgagcagtcagcgc
ggtgaaattttggttagtatgctctaccataaacagcttggagatgattggctggctttg
gcagatgctttacgtattgagcttggcattaatattattggccgtgcgcgcaaacaaaaa
catgtgttgggtatgggctacattatggaaacccttaacataaagggtcgccagtatcat
tatcaacaagttgaaaatgcatttactcagcctaatgcgtgcgtcaatgaaaaaatgatc
acttgggcttgtcagagtattgagcgttttggcaacacagacaaacccgatttattagag
ctatattgtggtaatggcaactttacagtgcctttggctgcacaatttcgtaaggtaatg
gctacagaaattgctaaatcttcagttaattcagcccattttaacctagccgaaaataat
gttgataatgtgactattgtccggctttctagtgaagaaatgacgcaagccttggctgga
gtgcgtgcttttaggcgcttggctgatgtagacttaacaagctttgaatttggtactatt
ttagtagatccaccaagagctggtttggatccagacactttacgattagtacaacaattt
gatcaagtgatttatatttcctgtaacccagaaacattgctagataacttacaagagctc
aaacaaacccacgaccttaaacgcttggctttgtttgaccaatttccttatacccaccat
gctgaatgtggtgtggtgctgcataaacgtaattcatag
DBGET
integrated database retrieval system
