Neptunomonas japonica: NEJAP_0267
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Entry
NEJAP_0267 CDS
T07060
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
njp
Neptunomonas japonica
Pathway
njp00300
Lysine biosynthesis
njp00470
D-Amino acid metabolism
njp01100
Metabolic pathways
njp01110
Biosynthesis of secondary metabolites
njp01120
Microbial metabolism in diverse environments
njp01230
Biosynthesis of amino acids
Module
njp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEJAP_0267 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEJAP_0267 (dapF)
Enzymes [BR:
njp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NEJAP_0267 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Draxin
Motif
Other DBs
NCBI-ProteinID:
BBB28225
UniProt:
A0A7R6SUD1
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All DBs
Position
305498..306331
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AA seq
277 aa
AA seq
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MLVRFTKMHGLGNDFMVVDLVTQRIRLSEDKVRKLADRHLGIGFDQLLLVEPPTNPEMDF
RYRIYNADGSEVEHCGNGARCFARFVRDKRLTNKDVIAVETANGKAILTIFPDNQVEVDM
GAPELLPKAVPFVAQEQSAVYSVDVESQHVDISVVSMGNPHGVLVIDDTDSAPVETLGPL
LEAHTRFPAKANIGFMQILSSTEVKLRVYERGAGETMACGTGACAAVVAGRLRGILDENV
KVHLPGGDLQVSWKGGEKDSVMMTGPAATVFEGQVFI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttggtacgctttaccaaaatgcatggcttaggcaatgactttatggttgttgacttg
gttacacagagaatcaggctttcggaagataaagtcaggaagctggctgatcgtcattta
ggcattggttttgatcagctattactggttgaaccaccgactaatcctgagatggatttt
cggtatcgaatctataatgctgacggctctgaagttgagcattgtggtaatggtgcccgc
tgttttgcacgtttcgtgcgtgataaacgccttactaataaggatgtgattgcagttgaa
acggctaacggcaaggcaatacttaccatttttccggataaccaagtcgaagtcgatatg
ggagctcctgagctgctacctaaggctgttccgtttgtcgctcaagagcaatcagcggtg
tattcggttgatgttgaaagtcagcatgtggatatctcagtggtttctatgggaaatcca
catggcgtgttagtcatcgatgataccgacagtgctccggttgaaacactcggtccattg
ttagaagcgcacacgcgttttcctgcaaaagcgaatattggttttatgcagattctctct
tcgacagaagtgaaattacgtgtgtatgagcgtggtgctggtgaaacgatggcgtgtggc
acaggggcttgtgcagcagtcgtggcagggcgtcttcgaggtatcttagatgaaaatgtt
aaggtacatcttcctggaggagatctacaggttagttggaaaggcggtgaaaaagattcc
gttatgatgacggggcccgcagcgacagtgtttgaaggtcaggtgtttatatga
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