Neptunomonas japonica: NEJAP_0335
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Entry
NEJAP_0335 CDS
T07060
Symbol
ada-alkA
Name
(GenBank) AraC family transcriptional regulator, regulatory protein of adaptative response/DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
njp
Neptunomonas japonica
Pathway
njp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEJAP_0335 (ada-alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
njp03000
]
NEJAP_0335 (ada-alkA)
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_0335 (ada-alkA)
Enzymes [BR:
njp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NEJAP_0335 (ada-alkA)
Transcription factors [BR:
njp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NEJAP_0335 (ada-alkA)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEJAP_0335 (ada-alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
MHYT
Motif
Other DBs
NCBI-ProteinID:
BBB28293
UniProt:
A0A7R6P6N1
LinkDB
All DBs
Position
complement(372016..373479)
Genome browser
AA seq
487 aa
AA seq
DB search
MNMQHEHLYQAMVSHDDRFDGHFYIGVSSTGVYCRPICRVRTPKRENCTFYTTPAQAETA
GFRPCLKCRPELSPQTLDNTFQKDTIISSIIQLEDQGEIDFSISALAKKLNITERHLRRI
TLEQLGTTPSNFILTRRLLRAKKLLTETPLSIAHIALISGFGSLRSFNTHFKSRYRLTPS
ALRKPPSTQNRAADNSPEITIQLLLQYRPPYDWLQLIDFLQHRSIQGVEHIEGQSYIRTV
SLSVKGESYNGWLQIQPHKNKDNTLTVELSESLAAIIPILLRKLEHQFDLHAEPSLISNQ
LNFLARNNPGIRLPGSFDGFEMSVRAILGQQITVKAAHTLAKRFAQAFGKPIKTPLTSLT
TLFPSPQRVAGLSIDQIASLGIISKRAQTIISLAQSICKDEISLQPTAHPEQTIAALEKL
AGIGPWTAHYIAMRALHWPDAFPHTDLGVMKALKEKRPKQTLLLAEKWRPWRAYAVMHLW
ESLKQEK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcagcatgaacatttgtatcaagcgatggtttctcatgatgatcgcttcgat
gggcacttttatatcggcgtttctagtaccggtgtctactgtcgccccatttgccgagtg
cgcacaccaaaacgtgaaaactgcacgttttatacgacgccagcccaagcagaaacggcg
ggctttagaccttgtctaaaatgtcgtcccgaactctcaccacaaacgttagacaataca
ttccaaaaagacacaattatctcttctattattcaattagaagaccaaggagagatcgat
tttagtatttcggctttggcaaaaaagctcaatattactgagcgccatttacgtagaatt
actctagagcaactgggcacaacacccagtaacttcattcttaccagaaggctgcttcga
gcaaaaaaactactcactgagacaccactttcaattgctcatattgcacttatcagtggt
tttggcagcttacgctcatttaacacccactttaaaagccgttaccgcttaacgccatct
gcactacgcaaaccaccaagcacacaaaatcgcgctgccgataacagccctgaaataacc
attcaactactgttacaataccgcccaccctacgactggctacaattaattgattttttg
caacaccgaagcattcaaggcgtagaacatattgaaggccagtcttatattcgaacagta
agcctatcggtcaaaggcgagtcatataatggctggttacaaatacaaccccataagaac
aaagacaacactctcactgttgagttatcagaatcgcttgccgctatcattcctatttta
ttaagaaaactagagcatcagttcgacctgcatgcagagccctctctaatatctaatcag
ctgaattttctcgcaagaaacaaccctgggattcgacttcccggtagttttgatggcttt
gaaatgtccgtcagagcaatactcggtcaacaaattacagtaaaagctgctcacacgtta
gccaagcgttttgctcaagcttttggaaaaccgattaagacacccttaacaagcctcaca
acgctgtttccaagtccacagcgagtcgcagggttaagtattgatcaaattgcttccctt
ggtattatcagcaaacgcgctcagactattatttctctggcgcaaagcatctgcaaagat
gaaatatcactacaacccaccgcacatccagagcaaacgatagcagcattagaaaagctt
gcgggtattggtccttggacggcacattatattgccatgcgcgcactgcactggccagac
gccttccctcatactgatttaggcgtgatgaaagcattaaaagaaaaacgtcccaaacag
acgttgctactcgctgagaagtggcgcccttggcgtgcttacgccgtcatgcatttatgg
gaatctttaaaacaagaaaaataa
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