Neptunomonas japonica: NEJAP_0386
Help
Entry
NEJAP_0386 CDS
T07060
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
njp
Neptunomonas japonica
Pathway
njp00260
Glycine, serine and threonine metabolism
njp00460
Cyanoamino acid metabolism
njp00630
Glyoxylate and dicarboxylate metabolism
njp00670
One carbon pool by folate
njp00680
Methane metabolism
njp01100
Metabolic pathways
njp01110
Biosynthesis of secondary metabolites
njp01120
Microbial metabolism in diverse environments
njp01200
Carbon metabolism
njp01230
Biosynthesis of amino acids
njp01240
Biosynthesis of cofactors
njp04981
Folate transport and metabolism
Module
njp_M00140
C1-unit interconversion, prokaryotes
njp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEJAP_0386
09102 Energy metabolism
00680 Methane metabolism
NEJAP_0386
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NEJAP_0386
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NEJAP_0386
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NEJAP_0386
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NEJAP_0386
Enzymes [BR:
njp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NEJAP_0386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBB28344
UniProt:
A0A7R6P9I9
LinkDB
All DBs
Position
436557..437813
Genome browser
AA seq
418 aa
AA seq
DB search
MFSKDMSIADFDTDLWSAMQSEATRQEEHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
NKRYYGGCEYVDVVEQLAIDRACELFDATYANVQPHSGSQANAAVYMALCQPGDTVLGMS
LAHGGHLTHGAAVSFSGRIYNAVQYGLNAETGEIDYADVERLALEHKPKMIVAGFSAYSG
VVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPSPMQFADVVTTTTHKTLGGPRGGLI
LSARADEDLQKKLNFAVFPESQGGPLMHVIAGKAVCFKEAMQPEWKAYQAQVVKNAQAMA
ETFKSRGINIVSDGTENHLFLMDLIDKDYSGKDADAALGRANITVNKNSVPNDPRSPFVT
SGLRIGTPAVTRRGFKEAEVTQLANWICDVLDDITNEETSARVKAQVLDICSRFPVYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaagatatgtcaattgccgattttgatactgatctgtggtcagcaatgcag
tctgaagccacacgtcaggaagagcacatcgaattgattgcttctgaaaattataccagc
ccacgagtcatggaagctcaggggtctgtactgactaataaatatgctgaaggttatcct
aataagcgttactacggtggttgtgagtatgttgatgttgtagagcaactggccattgat
cgcgcttgtgagctttttgatgcaacttacgcaaacgtacagcctcactcaggttcacaa
gctaatgctgctgtatacatggcgttgtgtcagccaggtgatactgtcttaggtatgagc
cttgctcatggtggccatttaacacacggtgcagcggtgtccttttctggccgtatttat
aatgctgttcaatatggcttgaacgcggaaacgggcgaaattgattacgctgacgttgag
cgtttagcacttgagcataaacctaagatgatcgttgctggtttctctgcgtactctggc
gttgttgattggcagcgtttccgtgatatcgcggataaagtgggtgcatatctgtttgtt
gatatggcgcatgttgctggtttggttgccgccggtgtatacccgtcaccaatgcagttt
gcggatgttgttactaccactacgcacaaaacattaggtggcccacgtggtggtttgatt
ttgtctgctcgtgcagatgaagacttacagaagaaactgaattttgctgttttccctgag
tctcagggtggtcccttgatgcatgttattgcaggtaaagcggtttgctttaaagaagca
atgcagcctgagtggaaagcatatcaggcacaggttgtaaaaaatgcacaggcaatggct
gaaacgtttaaatctcgtggcattaatattgtttctgacggaacagagaaccatttgttc
ttaatggatctgattgataaagactacagtggtaaagatgcagatgctgccttaggtcgt
gcaaatattactgtgaacaaaaactctgtccctaatgatccacgttcaccgtttgttaca
tcgggtctgcgtatcggcacacctgcggtaacacgtcgaggctttaaagaggcagaagtt
acccagttagctaactggatctgtgatgttcttgatgatattactaatgaagaaacgagc
gcgcgtgttaaagcacaagtactcgatatctgtagccgtttccctgtttataaatag
DBGET
integrated database retrieval system
