Neptunomonas japonica: NEJAP_0487
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Entry
NEJAP_0487 CDS
T07060
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
njp
Neptunomonas japonica
Pathway
njp03410
Base excision repair
njp03430
Mismatch repair
njp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEJAP_0487 (recJ)
03430 Mismatch repair
NEJAP_0487 (recJ)
03440 Homologous recombination
NEJAP_0487 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_0487 (recJ)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NEJAP_0487 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NEJAP_0487 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NEJAP_0487 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBB28444
UniProt:
A0A7R6P720
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All DBs
Position
545315..547057
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AA seq
580 aa
AA seq
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MKHVTIHRRAVPNEHSPIFKEVPSALARIYAARGIQSKQQLGRNLKELLPDTQMKGMDAA
VSRLLQAVKANESIMIVGDFDCDGATSTAVAVLGLRMMGATNIDYLVPNRFEYGYGLSPE
IVDVAFTQSPQLLVTVDNGISSVEGVARANQLGMDVVVTDHHLAGHVIPQAVAIVNPNQP
GCSFEAKSTCGVGVIFYVLIALRRALQAESWFEGSGMPAPNLASLLDLVALGTVADVVAL
EHNNRTLVYQGLQRIRAGYARPGLLALIEIAGRRKERLVASDLGFAVAPRLNAAGRLEDM
SIGIECLLADDPEYARELAQTLDQLNLDRRAIEQDMQQQALSWLDEMHFDIDTLPYGVCL
YDEGWHQGVVGILASRIKDRTHRPVIAFAPGENGEIKGSARSIPGLHIRDALDQIASRFP
ELISKFGGHAMAAGLTIAATGLERFREVFDEVVREQLSKEDLEQRLETDGVLQATDMTLA
LAENIREAGPWGHQFPEPLFDGVFRVLQQRIVGQRHLKIVLMERDSGLALDGIQFNTDLA
VWPDENINSVRAVYKLDVNEFRGQQSVQLMIEYLEPVVEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatgtaaccattcatcgtcgtgctgtgcctaatgagcactctcctatatttaag
gaagtacctagcgctttggcgcgtatttatgcggcacgaggcattcaaagcaagcagcag
ttgggtcgtaatttaaaagaattacttcctgatactcaaatgaaaggaatggatgcggct
gtctcgcgtttgctgcaggcggttaaagccaatgagtcgatcatgattgttggtgatttt
gattgtgatggtgcgaccagtactgctgttgctgtattggggttgcgaatgatgggggcg
actaatattgattacttagtaccgaatcgttttgagtatggctatggattaagcccagag
attgttgatgtcgcttttactcaatcaccacagttattagtcacggttgataatggtatc
tccagtgtagagggggtggcgcgcgccaatcaactcggtatggatgttgtggtaacagat
caccacctagctgggcatgttattccgcaggcggtggcgattgttaaccctaatcagccg
gggtgtagctttgaagcaaaatcgacttgcggtgtgggtgttatattttatgtgttaatc
gcactgaggcgagcgcttcaggcagaaagctggtttgagggaagtggtatgccagcacct
aacttggcatcgttacttgatcttgttgcgctgggcactgtcgctgatgtcgtggcgcta
gaacacaacaaccgaacattggtatatcagggattacaacgtattcgtgcaggatacgca
cgcccgggtttactcgcattaatagagatagcgggacggcgtaaagaacgcttggtcgcc
agtgatcttggctttgctgtagcaccgcgtttgaatgcggcggggcgccttgaagatatg
tcgattggtattgaatgcttgttggcagatgatccagaatatgcgcgtgaattagcgcag
acgttagaccagctcaatttggataggcgtgcgatagagcaagatatgcaacaacaagca
ttgagttggttggatgaaatgcactttgatatagatacgctgccttacggtgtgtgttta
tatgatgaaggttggcatcagggtgttgtcggcattctggcttctcgcataaaagatcgc
actcatcgccccgtcattgcatttgctcctggtgaaaatggagagataaaaggttcggct
cgctctataccgggcttgcatattcgtgatgcgctcgatcaaattgcgagtaggtttcct
gaattaattagcaaatttggaggccatgccatggccgcgggcttgacgattgctgccaca
ggtttggagcgttttcgagaggtatttgatgaggttgttcgagagcagctctctaaagaa
gatttagaacagcggttagagaccgatggagtgttgcaggctaccgacatgacacttgca
ttagctgaaaatattcgcgaagcagggccatgggggcaccagtttcctgagccgttgttt
gatggtgtctttagagtattgcagcaaagaattgtaggtcaacgtcatttaaaaattgta
ttgatggagcgcgactctggtttagcacttgatggtattcagtttaatacggatttagca
gtatggcccgacgagaacattaatagtgttcgtgctgtttataaattagatgtaaatgag
ttcaggggacagcaatcagttcagttaatgattgaatatttggaacctgttgttgagaaa
taa
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