Neptunomonas japonica: NEJAP_0587
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Entry
NEJAP_0587 CDS
T07060
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
njp
Neptunomonas japonica
Pathway
njp03030
DNA replication
njp03430
Mismatch repair
njp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEJAP_0587 (dnaE)
03430 Mismatch repair
NEJAP_0587 (dnaE)
03440 Homologous recombination
NEJAP_0587 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
njp03032
]
NEJAP_0587 (dnaE)
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_0587 (dnaE)
Enzymes [BR:
njp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEJAP_0587 (dnaE)
DNA replication proteins [BR:
njp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEJAP_0587 (dnaE)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEJAP_0587 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
CcmE
Motif
Other DBs
NCBI-ProteinID:
BBB28544
UniProt:
A0A7R6SUI6
LinkDB
All DBs
Position
651112..654606
Genome browser
AA seq
1164 aa
AA seq
DB search
MSSTSFIHLRVHTEFSLIDGLVRVKGLVAAAKEAGMPAVAMTDQVNLFALVKFFKASSGA
GIKPICGADILVLNENDHEAEPYRVTLLVQNALGYRHLMELISRAYAEGQRFILDKALVK
KSWLIEKSEGLIALSGAREGEVGRAMISGNGMAEAILDEWMQMFPNRFYLEVQRTGRPRE
DIIVSESVRLGLAKQCPLVATNEVMFLKESDFDAHEARVCINQSRTLEDPRRTRNYSAQQ
YFRTAEEMVELFSDIPSAIENTVEIAKRCNIELDLGTYYLPKYPVPEGMMMDEFFCKVSE
DGLEQRLEVLLDKNDPEYEVKRKAYDDRLTFELEIITQMGFPGYFLIVMDFIQWAKDNDI
PVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDQVID
YVARTYGRDAVSQIITFGTMAAKAVVRDVARVQGKPFGLADKLSKLIPFEVGITLNKAME
QEPALSDFVSGSEEAQEIMEMAYKLEGVTRNVGKHAGGVVIAPTKLTDFSATYCDEEGHG
LVTQFDKNDVEEAGLVKFDFLGLRTLTIIDWAMKTINGIRAKEDKEPLDISLIPLEDKTV
FDLLQSANTTAVFQLESSGMKDLVRRLLPSRFEDIVALVALFRPGPLQSGMVDDFINRKH
GRAEMAWPHADYQLDSLQPVLEPTYGIILYQEQVMQIAQVMAGYSLGGADMLRRAMGKKK
PEEMAKQREGFLVGCEENNIDRDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKT
HYPAPFMAAVMSADMQNTEKVVIFIEDCRAMGLPPELPDVCSGEYMFTVNEEGKIVYGLG
AIKGVGEGPIESIIKARNDGAGEFKDFFDFCKRVGAKKLNKRVLEALVRSGALDKLGADR
AVLWAAISDGLRTAGQNERNQSAGIFDMFGEVEAEQPRDPYEDYKGVRTWSDKERLKGER
DTLGLYLTGHPIDEYDKELSRFVSKKIVDLQPARGRQQKIAGLIVDQRVKKTKRGDSLCF
LTLDDRSARIDITLYGEIYEQTRDWAVKDTIVIMEGEVNQDDYSGGLKVRCNKLSSISQA
RTQYASLFKVKSAHKMLSGRYLKQFENILQTYSSAEGLPVAVEYQRDDAAGAVRLGDNWR
VDPSDELILALKEHFGDESIMLEY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacctcatttatacacttgcgtgtacataccgaattttcactaattgatggg
ttagtgcgtgttaaaggcttagttgcggcggcaaaagaggcaggtatgcccgcagtagcg
atgacggaccaggttaatttatttgccttggtaaagttttttaaggcgtcatcgggcgct
ggaattaagcccatatgtggggctgacatactggtacttaatgaaaatgaccatgaggct
gaaccttatcgcgttactttgttggtacaaaatgcactaggttatcgacatttgatggag
ttaatttctagagcttatgccgaagggcagcgttttattttagataaagctctggttaaa
aagtcgtggctaatagaaaaatcagaagggcttatagcattatccggtgcacgtgaaggc
gaagttggacgagccatgatttctggtaatggaatggctgaggctattctagatgaatgg
atgcaaatgtttcctaaccgtttctatttagaggttcaaagaacaggacgcccaagagag
gatatcattgtttctgagagcgttcgtttgggcttagctaaacagtgcccactagttgcg
acgaatgaagttatgttcctcaaagaatcagattttgacgcgcacgaagcacgagtatgt
attaaccaaagtcgcacgttagaagaccctaggcggacccgtaattactcagcacaacag
tattttcgtactgcggaagagatggttgagcttttctccgacattccaagtgcaatagaa
aatactgttgagatagctaaacgttgcaatattgaactagatttaggcacctattatctc
cccaagtaccctgttcctgaagggatgatgatggatgagtttttctgtaaggtctcagaa
gacggtcttgaacagcgcttggaagttctgttagataaaaatgatcccgagtatgaagta
aagcgcaaagcatatgacgatcgcctgacttttgagttagaaatcattactcaaatgggt
tttcccggttactttttgatcgttatggacttcatacaatgggcgaaagataatgatatt
ccagtcgggccgggccgtggttctggtgccggttcattagttgcctatgcacaaaaaatt
actgatttagacccattagaatacgaccttctgtttgaacgatttcttaacccagaacgt
gtttcaatgcccgattttgatatcgatttctgcatggataatcgtgatcaggttattgat
tatgtggcacgaacttatgggcgtgatgcagtttcacagattattacctttggtacgatg
gctgccaaagctgtggttcgagatgtggcgcgtgtgcagggtaagccatttggtttagct
gataagctgtctaagttgattccttttgaagtaggaataacgctgaataaagcaatggag
caggagcctgctttgagcgattttgtctcaggcagtgaagaagctcaagaaattatggag
atggcttacaagctggagggggtgaccagaaacgttggtaagcatgcgggcggtgtggtt
atcgccccaacgaagctcactgatttttcagcaacctattgtgatgaagaaggtcatgga
ttagttacacagttcgataaaaatgatgttgaagaagcgggcctcgttaagtttgacttc
ctaggtttgcgcacacttaccatcattgattgggcgatgaaaacaattaatggtattcgt
gctaaagaggataaagagcctctcgatatttcattaatacctttggaagataaaacggtt
tttgacctactgcagtcagcaaacacaacggctgtgtttcagctagagtctagtggtatg
aaagacttggttcgacgtctcttaccttctcgttttgaagatattgtcgctctggtagcc
ttgttccgtcccggacctttgcagtcaggcatggtagatgactttatcaatcgtaagcat
gggcgagctgaaatggcttggccgcacgctgattatcagttagatagcttgcagccagtg
ctagaacctacctatggaattattctttaccaagagcaggtaatgcaaattgctcaggtt
atggcaggctactcgctcggtggtgccgatatgctacgtcgtgctatgggtaagaaaaaa
ccggaagagatggcgaagcagcgtgaaggctttttggttgggtgcgaagaaaacaatata
gatcgagaccttgccggaaatatttttgatctggttgaaaaatttgctggctatggtttt
aacaaatcacattcagccgcttatgctttagtttcttaccagaccgcttggctaaaaacg
cactacccagctccttttatggccgcagtaatgtctgccgatatgcagaatactgaaaaa
gtcgttatctttattgaagattgccgagcaatggggttgccgcctgaattaccagatgtg
tgctctggcgagtatatgtttacggtgaatgaggagggtaaaattgtttatgggcttggg
gccattaagggtgttggagaaggccccatagagtctattattaaagcgcgcaatgatggc
gctggtgaatttaaagatttttttgatttctgtaaaagagtcggtgctaagaagcttaac
aagcgtgtattagaagcgcttgttaggtccggcgcattagataaattgggagccgatcgg
gctgttctttgggctgcgattagtgatggtttacgtacagcaggccagaatgagcgcaat
caaagtgctggtatctttgatatgtttggagaggtggaggctgagcagcctcgtgatcct
tacgaagattataaaggggtacgcacttggtctgataaagagcggcttaaaggtgaaaga
gatacgcttggtttatatctaactggccaccctattgatgagtacgacaaggagcttagc
cgctttgtctctaaaaagattgtagatctgcaaccggcgcgcggtaggcagcaaaagata
gcgggtttaattgttgatcagcgagtgaagaaaactaaacgtggtgattctctttgcttt
ttgacattggatgaccgctctgcacgtatcgatattacactttacggtgaaatatatgag
caaactcgtgattgggcggtcaaggacacgattgtcattatggagggtgaggttaaccaa
gatgattattcaggcggtctcaaggttcgttgtaataaattatcaagcatttcacaggca
agaacgcagtatgcttcgttgtttaaagtaaaatccgcccacaagatgctctctggtcgg
tatttaaagcagttcgagaatattttacagacgtatagttctgcggagggtttgccggtt
gccgtagaatatcaaagagatgatgccgctggagctgttagacttggagataactggaga
gttgatccttcagatgagctgattttggcgttgaaagagcattttggtgacgaaagcatc
atgctagagtactga
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