Neptunomonas japonica: NEJAP_0593
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Entry
NEJAP_0593 CDS
T07060
Symbol
truD
Name
(GenBank) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
njp
Neptunomonas japonica
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
njp03016
]
NEJAP_0593 (truD)
Enzymes [BR:
njp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NEJAP_0593 (truD)
Transfer RNA biogenesis [BR:
njp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEJAP_0593 (truD)
Prokaryotic type
NEJAP_0593 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBB28550
UniProt:
A0A7R6PQH3
LinkDB
All DBs
Position
660374..661414
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AA seq
346 aa
AA seq
DB search
MDLPTQYRYLYNPPTSQATIRQLPEDFHVVEIPSFSAEGEGEHEFLLIRKTGENTDWVAK
LLAKFCQIPIKDVGYAGKKDRHAVTEQWFSVRLPVTRKINWALFGGESIHVLESVRHQRK
LRLGALLGNRFSIRLRNLTNEDDFVGRLEKIKAGVPNYFGEQRFGHGGGNLTKGLALING
EFKERQRHKKGLYISAVRSWLFNHIVSQRITQNLWDSVLPGDMMMLSGSRSHFLAETADE
SLLSRLKEHDIHLSGPLWGRGSTLVQGEAAEWEGEVVRPWESVTERLEHLGLQQERRALR
LIPEGLRAVKESDGQWLLSFSLPAGAFATSVLRELCEPLTAGIEDK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcctacccagtaccgctatctgtacaacccacctactagccaagccactatt
cgtcagttacctgaagattttcatgttgttgaaattccttcatttagtgcggaaggtgag
ggggagcatgagtttctgcttattcgtaaaactggagagaatacagattgggtagcaaag
ctgttagctaagttctgccaaatccctattaaagatgtcggctatgccggtaaaaaagat
cgtcacgccgttacagagcagtggtttagcgtacgcttgccggttacacgtaaaataaat
tgggctctttttggtggtgagtcgattcatgtacttgaatctgtaaggcatcaaagaaaa
cttaggctaggtgctttactaggtaaccgcttctctattcgcttgagaaacctgacaaat
gaagacgactttgttgggcggcttgaaaaaataaaagcgggcgtacctaattattttggt
gagcaacgctttgggcatggcggtggtaacttgaccaaaggtttagcgctgattaatggt
gagtttaaagagcgccaaaggcataaaaaaggtttatatatttcagctgttcgctcttgg
ttgtttaatcatatagtttcgcagcgcattacccaaaatttatgggatagtgtattaccg
ggcgatatgatgatgttaagtggttcacgtagtcattttcttgccgaaacagctgatgag
agtttgctctcaaggctgaaagagcatgatatacatttaagtggtcctttgtgggggcga
ggttcaacgcttgtgcagggagaagccgctgagtgggaaggagaggttgtccgtccatgg
gagagcgtcaccgagcgtcttgagcatttaggtttgcaacaagagcgtcgcgcgttacga
ttgataccggaaggattaagagcagttaaagaatcagatgggcagtggttgctgagcttt
tcacttcctgcaggggcttttgccacaagcgtgctcagagaattgtgtgaacctttgacg
gctggaatagaagataaatag
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