Neptunomonas japonica: NEJAP_0601
Help
Entry
NEJAP_0601 CDS
T07060
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
njp
Neptunomonas japonica
Pathway
njp00260
Glycine, serine and threonine metabolism
njp00460
Cyanoamino acid metabolism
njp00630
Glyoxylate and dicarboxylate metabolism
njp00670
One carbon pool by folate
njp00680
Methane metabolism
njp01100
Metabolic pathways
njp01110
Biosynthesis of secondary metabolites
njp01120
Microbial metabolism in diverse environments
njp01200
Carbon metabolism
njp01230
Biosynthesis of amino acids
njp01240
Biosynthesis of cofactors
njp04981
Folate transport and metabolism
Module
njp_M00140
C1-unit interconversion, prokaryotes
njp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEJAP_0601
09102 Energy metabolism
00680 Methane metabolism
NEJAP_0601
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NEJAP_0601
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NEJAP_0601
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NEJAP_0601
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NEJAP_0601
Enzymes [BR:
njp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NEJAP_0601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BBB28558
UniProt:
A0A7R6PS86
LinkDB
All DBs
Position
669098..670360
Genome browser
AA seq
420 aa
AA seq
DB search
MFSKNDQVQGYDEVLWAAVGKEEVRQEEHIELIASENYTSPRVMQMQGSVLTNKYAEGYP
EKRYYGGCEYVDVVEQLALDRAKELFGATYANVQPHSGSQANAAVYMALCAPGDTILGMS
LAHGGHLTHGSHVNFSGKIYNAVQYGLNEATGEIDYEEVERLAVEHKPKMIVAGFSAYSR
IVDWARFREIADKVGAYLFVDMAHVAGLVAAGLYPNPVPFADVATTTTHKTLRGPRGGLI
LSRDNELEKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFKEYQAQVIKNANAMAEV
LIERGFEIVSGGTENHLFLLSLIKQGLTGKAADAALGLANITVNKNAVPGDPQSPFVTSG
LRIGSPVVTTRGFKEAQCRTLAGWIADLLDVLNEPEALDAKIAEVKEQVKALCADYPVYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaaaatgaccaggttcagggatacgatgaggtattgtgggctgctgtaggt
aaagaagaagtgcgtcaagaagagcatatcgaactaatagcgtctgagaactatacaagc
cctcgtgtaatgcagatgcaaggctctgtacttactaacaaatatgcagaaggttaccct
gaaaagcgttactacggcggctgtgaatatgttgacgttgtagagcaactggctttggat
cgtgctaaagagttgttcggtgcaacgtatgctaatgttcagccgcattctggttcgcag
gcaaacgcagccgtttatatggctctttgtgcaccaggtgacactatcttgggtatgagt
ctggcacatggtggccacctgactcacggttctcacgtgaatttctcgggcaagatttac
aacgctgttcagtacggtctgaacgaagcgacgggcgagatcgattacgaagaagtagag
cgcttggcagtagagcataaaccaaaaatgattgttgctggtttctctgcttattcacgc
attgttgattgggcgcgcttccgtgagatcgctgataaagtgggcgcttacctgtttgtt
gatatggcacacgttgccggtttagttgctgcgggtttatatccaaacccagtacctttc
gctgatgtagcaacaaccactacgcataaaacgcttcgtggccctcgtggtggtttgatc
ctctctcgtgataacgaattagagaagaaactgaactctgcagtattccctggcggccaa
ggcggcccgctcatgcacgttattgcggctaaagcggtagcgtttaaagaagcattggag
ccggagtttaaagagtatcaggcgcaagtcattaagaacgccaatgcgatggcagaagtg
ctaattgagcgtggtttcgaaattgtttctggtggtactgaaaaccatctattcctacta
agccttattaagcagggcctaaccggaaaagcagctgatgcagcgctaggtcttgccaat
atcactgttaacaaaaatgcagtaccaggagatcctcagtctccgttcgtaacatcaggc
ctgcgtattggttctcctgtcgtcacaacgcgtggctttaaagaagcgcagtgtcgtacg
ctagcgggttggattgctgatctattggatgtactgaatgagcctgaagcacttgatgcc
aaaattgctgaagtaaaagagcaggttaaagcgctatgtgcggactacccagtttataag
taa
DBGET
integrated database retrieval system
