Neptunomonas japonica: NEJAP_0961
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Entry
NEJAP_0961 CDS
T07060
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
njp
Neptunomonas japonica
Pathway
njp00470
D-Amino acid metabolism
njp00550
Peptidoglycan biosynthesis
njp01100
Metabolic pathways
njp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEJAP_0961 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NEJAP_0961 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NEJAP_0961 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
njp01011
]
NEJAP_0961 (ddl)
Enzymes [BR:
njp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NEJAP_0961 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
njp01011
]
Precursor biosynthesis
Amino acid ligase
NEJAP_0961 (ddl)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
CPSase_L_D2
ATP-grasp_3
RimK
ATPgrasp_YheCD
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BBB28918
UniProt:
A0A7R6PSZ8
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All DBs
Position
1081252..1082199
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AA seq
315 aa
AA seq
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MTYRISEQQKNMFGRVAVIYGGNSAERPVSLNSGQAVYNALTAAGVNAFLLDLYGPAGEL
NPVEQLQQEKIDAAFLILHGRVGEDGVIQGLLEMMAIPYTGSRVAASALGMDKLRSKQLF
VGAGLPTPPFRVLRTESDLSLCAAELDFPLMIKPAHEGSSIGMHKVDNASDLRSAWEDAC
RYDQSVIAEKWITGAEFTVAVLNNKALPAIRLETPHDFYDYDAKYEANDTRYLFDDTLSP
EKDNELLRLSEQAFIAIGCKSWGRVDVMQDKEGHFYLLEVNTTPGMTDHSLVPMAAKQAG
ISFEQLVVEILKEAN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacatatcggattagtgaacaacaaaaaaatatgtttggtcgagtcgctgttatttat
ggcggaaattcagcggagcgtccagtttccttaaacagtggtcaggctgtttataatgct
ctgacagccgccggtgttaatgccttcttgcttgatctttatgggcctgcaggagagtta
aatcctgttgagcagttacagcaagaaaaaattgatgctgcttttttgattttgcatggt
cgtgttggcgaagatggtgttattcagggcttactggaaatgatggcaattccttataca
ggtagccgagttgctgcatccgctttgggtatggataagctgagaagtaagcaattattt
gttggcgcaggccttccaacaccgccatttcgggtgctacgtacagaaagtgatttatcg
ctctgtgctgcggaacttgatttccctttgatgatcaaacctgcgcatgaaggatctagc
attggtatgcataaggtcgataatgcatcagatttgaggtctgcttgggaagatgcatgt
cgttatgatcaaagtgttattgctgaaaagtggattactggggcggaattcactgtagct
gttttgaataataaagcgttaccagcaatacgcttggaaacaccgcatgacttttatgat
tatgatgcgaaatatgaggcgaatgatactcgctacttatttgatgacacgttaagccca
gaaaaagataacgagctacttaggttatcagagcaggcgtttattgctattggttgtaag
agttgggggcgtgttgatgttatgcaggataaagaagggcatttttatctcttagaagtt
aatacaacgccaggtatgacggatcatagcttggtgccaatggctgccaagcaagccggc
atcagttttgaacagctggtggttgaaatcttgaaagaggctaactga
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