KEGG   Neptunomonas japonica: NEJAP_1935
Entry
NEJAP_1935        CDS       T07060                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
njp  Neptunomonas japonica
Brite
KEGG Orthology (KO) [BR:njp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:njp02048]
    NEJAP_1935 (hsdR)
Enzymes [BR:njp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NEJAP_1935 (hsdR)
Prokaryotic defense system [BR:njp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NEJAP_1935 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: BBB29885
UniProt: A0A7R6PT16
LinkDB
Position
complement(2134917..2138189)
AA seq 1090 aa
MSSAKELHFQNDIIQQMVAQGWQLGSPAGYNRKLALYEEDLLGFVKDTQEAQWQKYCTLY
PQDPERHFLERVANQLDKGAGSSGGHANGTTASNREMRTFGTLGVLRNDLRDRGTRFTLC
QFKPEHDLNPDTLKRYQNNRLCVVPELVYSPYATQEHLEETGKKAKAWRIDLVLFVNGLP
IATLELKSEFKQAVNNAIKQYKETRLPKDPATNKAEPLLTFKRGAIVHFAVSQYEVYMAT
QLAGDDTYFLPFNKGTAEGGKGNDVPADPNEYATGYLWNEVLTPDNLLNILARFAHLQIE
DKEDWQGKKYKKETLIFPRYHQWDVVNKLVADARDNGPGHKYLIQHSAGSGKSNSIAWTA
HQLSSLYDGNGNKRFHSVIVVTDRTVLDDQLQETIYQFEHADGVVGRINNKEGGGSKSDK
LAAALENSQPIIIVTIQTFPFVLKAIENSVSLKERNYAVIADEAHSSQSGSTARQLKEVL
MVDSKNELEELTSEDFLDATVAARKDSKNLSYFAFTATPKAKTLELFGRLPDPTLPPSDD
NKPEAYHVYSMRQAIEEGFILDVLKKYISYKVAYQLAEKARQNDEEVDSKKAKIKLNQWV
RLHDYNIAQKVQVIIEHFKANVKGLLGGQAKAMVVTSSRKEAVRYKLAFDKYVAENKYKN
IRAMVAFSGEVEFSDKDPNAQALLGEKFTESNMNPDLKKRDLRKAFDSDDYQVMLVANKF
QTGFDQPKLCAMYVDKKLGGVECVQTLSRLNRTYPGKAVSGTFVLDFFNDPAEILEAFQP
YYQTAELTDVSDPNLVYDLSEKLKAQSIFYSHEVEQFCTAFFIKNKSSAAISNICKPAVE
RWQKRYLLAIDAYNTAKEMFERSKTTDDAVLIANAENSFKECKQEKDALEIFKKDLGSFV
RFYEFMSQIVDYDDKELEKLALFARHLRPMLREKISEEDEIDLGNVTLSHYRLSKIREQD
LKLNDDAGEYGLDPSNDVGSAKAKDKQEEYLSIILRRLNDLFITDELTDGDMLHYLQTVA
DKVGENERVMHQLSNNTPEQAFLGDFPQAVDDAVMGSSDAHQNQMMQYLSSPQVAQGFAR
VVFDMLINKS
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgagcagtgcaaaagagcttcattttcagaacgatatcattcaacagatggttgctcag
ggttggcagcttggctcacctgctggttacaatcgtaaactggcgttgtatgaagaagat
ctgctggggtttgtgaaagatacccaagaggcgcagtggcaaaaatactgcacgctgtat
ccgcaagacccagagcggcattttctggaacgcgtcgctaatcagctcgataaaggcgcg
ggcagctcaggcggtcacgccaatggcacaaccgccagcaaccgagaaatgcgtactttt
ggcacacttggcgtgttacgtaatgatctgcgtgatcgcggcacacgctttactctatgc
caattcaaacccgaacacgatctaaatcctgatacattaaaacgctatcaaaacaataga
ttgtgtgttgttcctgaactagtttatagcccttatgccacccaagagcatttggaagaa
accggtaaaaaagccaaagcatggcgtattgatctggtgctgttcgttaatggtttaccc
atcgcaacactggaattgaaatcggaatttaagcaagccgttaacaatgctattaaacag
tataaagaaacacgcctccccaaagacccagccaccaacaaagccgaaccgctgctcacc
tttaagcgcggggcgattgtgcactttgccgtgagccagtatgaagtctatatggcaaca
caattagcgggtgatgatacctattttctgccgtttaacaaaggtacagcagaaggcggc
aaaggtaatgatgtacctgccgatcccaatgaatacgcgaccggttatctctggaacgag
gtactaacccccgataatctgctgaatattctggcacgttttgcgcatcttcaaatagag
gataaagaggactggcagggtaaaaagtacaagaaagaaaccttaatcttcccgcgttat
caccaatgggatgtggttaataaactggtggccgatgcccgcgacaatggcccagggcac
aagtacctgattcagcacagcgcaggctccggcaaatccaactccatcgcctggacggca
catcagttatcatcgctttatgacggtaacggcaacaagcgcttccactcggtgattgtc
gttaccgaccgcaccgtactggacgatcaacttcaagaaaccatctaccaatttgaacat
gccgacggcgtggtagggcgcatcaataacaaagaaggcgggggttctaaatcagataag
ctggcggcagcattagagaactcgcaaccgattattattgtgacgattcagacgtttccc
tttgtgcttaaagcgattgaaaacagcgtgagtcttaaagaacgaaactatgcggtgatt
gccgatgaagcgcattcgtcccagtcgggttctacagcacgccaacttaaagaagtgctg
atggtggatagcaaaaatgagcttgaagaactcacctccgaagattttttggatgcgacc
gttgccgcgcgtaaagattcaaaaaacctcagttactttgcgtttacggctacgccaaaa
gccaaaacattagagttgtttggtcgcctgccagacccaacattacccccctcagatgac
aacaagcccgaagcctaccatgtttacagcatgcgccaagcgattgaggaaggctttatt
cttgatgtgcttaaaaaatacatcagctataaagtagcgtaccagctggcagaaaaagcg
cggcaaaacgatgaagaagtcgacagtaaaaaggccaaaattaagctgaatcagtgggtg
cgcctgcacgattacaatatcgcgcaaaaggtgcaggtgatcattgagcatttcaaagcc
aatgttaagggcttgctcggcggccaagccaaagcgatggtcgtgaccagctcccgtaaa
gaagcggtgcgttataagctggcgtttgataaatatgtagccgagaataaatacaaaaat
atccgagcgatggtcgcgttttcgggcgaagtagagttctcagataaagatccaaatgct
caagcgttattaggtgaaaaattcaccgaatcaaatatgaatcccgacttgaagaaacgg
gatttgcgtaaagcattcgattcagatgattatcaagtgatgttggtcgccaataaattc
caaacagggtttgatcaaccaaaactctgcgccatgtatgtcgataaaaaattaggtggc
gtggagtgtgtgcaaacgctctctcgcttgaatcgtacttatccgggcaaagccgtatcc
ggtacgtttgtgctggatttcttcaatgatccagcagagatattagaagcgtttcaacct
tactatcagaccgccgaactaacagacgtatctgacccaaacctcgtttacgacctgtct
gaaaagctaaaagcgcagagtattttttattctcatgaagtagagcagttctgtactgca
ttttttattaagaacaaaagcagtgcagctatcagcaatatttgtaaacccgccgtagag
cggtggcaaaagcgttacctattagctatcgatgcttacaacacggcaaaagagatgttc
gaacgcagcaagaccaccgatgatgcggtgttgattgccaatgcagagaacagttttaag
gaatgtaagcaggaaaaagatgcattagagatctttaaaaaggatctcggcagctttgtg
cgtttctatgagtttatgtcccagatcgttgattatgatgacaaggagctggaaaaactg
gcgttgtttgcacgacacttacgccctatgctgcgcgagaaaatatccgaagaagacgag
atagatctgggcaatgtgacgttaagccattaccgtttatccaagattcgtgaacaggat
ctaaagctaaatgatgatgccggtgaatacggtttagacccgagcaatgatgttggatca
gctaaggccaaggataagcaagaagaatacctctccatcatcctgcgacgcctgaatgat
ctgtttatcacagacgaactaaccgatggcgacatgctgcattacctacaaacggtagcg
gataaagtaggggagaatgaaagggtgatgcaccagctaagtaacaatacacctgaacaa
gcctttttgggcgatttccctcaggccgttgatgatgcggttatgggtagctccgatgca
catcaaaaccagatgatgcaatatctcagtagcccgcaagtagcccaaggctttgcacgg
gtagtgtttgatatgttgattaataagtcataa

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