Neptunomonas japonica: NEJAP_1979
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Entry
NEJAP_1979 CDS
T07060
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
njp
Neptunomonas japonica
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_1979 (sbcD)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NEJAP_1979 (sbcD)
Archaeal homologous recombinant proteins
NEJAP_1979 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
PcrB
FBPase_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBB29929
UniProt:
A0A7R6P9V9
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All DBs
Position
complement(2189153..2190304)
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AA seq
383 aa
AA seq
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MKILHTSDWHIGRQFHNVSLLDDQRHVLNQIVDIAEQQQVDVLLVAGDIYDRSVPPSQAV
ALLDDVLDRVNQLKIPVIMISGNHDGAARLSFASSQLAQTGVHILADLEQMSHPVTLQDK
YGDVAFFGVPYADPVSVRHVLGVEASTHDEAMAQVVASLQSSIPTNTRTVLLSHCFIDGG
EESESERPLSIGGAERVSYKHFASFDYVALGHLHGRQYKGADTIRYSGSILKYSFSEEKQ
IKSVTLVDMGSQGVDEVIQIPLQPIRDMRTITGELSEILSQAKDDPKNDDYLQIRLTDKQ
AILDVMGKLRDVYPNVLHIERPGLMAANPQQSARRDQLKKGEFSMFSDFFEQVNGEPLTK
EQQTYVSQTLTDLHDKDLLQKVL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatactgcatacatcggattggcatattgggcgacagtttcataatgtttctctg
cttgacgatcagcgccacgtactgaaccaaatagtagatattgccgagcaacaacaagtg
gatgtattgctggtcgcgggcgatatatatgaccgttctgttcctccatcacaagcggtt
gctttgctagatgatgtattggatcgagttaatcaattaaaaattccggtcattatgatt
agtggtaatcatgatggtgcggcgcgtttgagtttcgcttcttctcagttggcgcaaact
ggggtgcatatattggcggatcttgagcaaatgtctcaccccgttacgctgcaagacaaa
tatggtgatgttgctttttttggggttccctatgctgatcctgtttcagtaaggcatgtg
cttggggtggaagcgagtacgcatgatgaggcgatggcacaggttgtggcttctttacag
tcgagtattcctaccaatactcgcactgtgttgttgagccattgctttattgatggtggt
gaagagtctgaatcagaacgcccattgtcgataggtggggctgagcgagtttcttataag
catttcgcatcgtttgattatgtcgcgttagggcatttgcatggccgccaatataaaggt
gccgataccattcgttactcaggttctatccttaaatattctttttctgaagagaagcaa
ataaagtcggtaaccctcgttgatatgggtagtcagggtgttgatgaggtcatacaaatt
cctttgcagcccattagagacatgcgcaccattaccggtgagttaagtgagattctttcg
caagccaaagatgaccctaaaaatgatgattatttgcaaatacgcttaacggataaacaa
gcgatactagatgtgatgggaaaattacgcgatgtgtaccctaacgtactgcatattgag
cgccccggcctgatggcggctaatccgcagcaaagcgcccgtcgtgatcagcttaaaaaa
ggtgagttctctatgtttagtgatttttttgagcaggtcaatggagagccgctgactaaa
gagcagcaaacttatgtgtcgcaaacactcaccgatctacatgataaagatctactgcaa
aaggtgttgtaa
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