Neptunomonas japonica: NEJAP_2080
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Entry
NEJAP_2080 CDS
T07060
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
njp
Neptunomonas japonica
Pathway
njp00071
Fatty acid degradation
njp00310
Lysine degradation
njp00362
Benzoate degradation
njp00380
Tryptophan metabolism
njp01100
Metabolic pathways
njp01110
Biosynthesis of secondary metabolites
njp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
NEJAP_2080 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
NEJAP_2080 (gcdH)
00380 Tryptophan metabolism
NEJAP_2080 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NEJAP_2080 (gcdH)
Enzymes [BR:
njp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
NEJAP_2080 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
HpaB_N
Motif
Other DBs
NCBI-ProteinID:
BBB30029
UniProt:
A0A7R6SVW3
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Position
complement(2290916..2292091)
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AA seq
391 aa
AA seq
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MSKSAFVWEDPFLLDQQISDEERMIRDAARDYMQGQLMPRVLMANRNETFDVEIMKELGE
LGLLGSTLPEEYGCAGASHVSYGLVAREVERVDSGYRSAMSVQSSLVMHPIYAYGSEEQR
QKYLPKLASGEWIGCFGLTEPDAGSDPAGMRTRATKVDGGYIVKGSKMWITNSPVAHVFV
VWAKLDGVIRGFVLEKGMKGLSAPKIEGKFSLRASITGEIVMEDVFVPDENILPNVSGLS
GPFGCLNKARFGIAWGALGAAEFCWQAARQYTLDRKQFGRPLAQTQLVQKKLADMQTEIS
LGLQGCLRMAQMMDAGNCPVELISLMKRNNCGKALDIARVSRDMHGGNGIADEFHVIRHV
MNLEAVNTYEGTHDIHALILGRAQTGLQAFF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcagcttttgtttgggaagatcctttcctgttagaccagcagattagtgat
gaagaacgaatgattcgtgatgcggcgcgtgattatatgcaagggcagctaatgccacgc
gtattaatggcgaaccgtaatgaaacattcgatgttgaaattatgaaagagctgggcgag
ctgggtttgctgggtagcaccctaccagaagaatatggctgtgccggtgctagccatgtg
agttatggtcttgtcgctcgtgaagttgaaagagttgatagtggttaccgttcagcgatg
agcgtacagtcttcgcttgtaatgcatcctatctatgcatatggcagtgaagagcagcgt
caaaagtatcttccaaaacttgccagtggtgaatggattggttgctttggtctaacagag
cctgatgcaggttctgaccctgctggaatgcgcactcgtgctacgaaggttgacggtggc
tacatcgttaaaggtagcaagatgtggattactaattcacctgttgcacacgtttttgtt
gtatgggcaaaactagacggtgttattcgtggtttcgtactagaaaaaggtatgaagggt
ctatctgcacctaaaatcgaaggtaagttctcattacgcgcctctatcacgggtgagata
gtcatggaagatgtcttcgttcctgatgaaaatattttacctaacgtttctggcttatct
gggccattcggttgcttgaataaagcgcgctttggtatcgcttggggggctttaggtgct
gctgagttctgttggcaggctgcacgtcagtacactttagatcgtaagcagtttggccgc
ccactagcacaaactcagttagtacagaaaaaactagcagacatgcaaacagagatttca
cttggtttgcagggttgtcttcgtatggcgcaaatgatggatgctggcaactgcccagta
gaactaatttccctgatgaagcgtaataactgtggtaaggcgctggatattgctcgtgta
tcacgtgatatgcatggcggaaacggtattgctgatgagttccacgtgattcgtcatgtg
atgaacctagaagcggttaatacgtatgaaggtacgcatgatattcatgcgttgattctc
ggtcgtgctcagactggtttacaggcctttttctga
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