Neptunomonas japonica: NEJAP_2385
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Entry
NEJAP_2385 CDS
T07060
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
njp
Neptunomonas japonica
Pathway
njp00010
Glycolysis / Gluconeogenesis
njp00020
Citrate cycle (TCA cycle)
njp00260
Glycine, serine and threonine metabolism
njp00280
Valine, leucine and isoleucine degradation
njp00310
Lysine degradation
njp00380
Tryptophan metabolism
njp00620
Pyruvate metabolism
njp00630
Glyoxylate and dicarboxylate metabolism
njp00640
Propanoate metabolism
njp00670
One carbon pool by folate
njp00785
Lipoic acid metabolism
njp01100
Metabolic pathways
njp01110
Biosynthesis of secondary metabolites
njp01120
Microbial metabolism in diverse environments
njp01200
Carbon metabolism
njp01210
2-Oxocarboxylic acid metabolism
njp01240
Biosynthesis of cofactors
Module
njp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
njp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
njp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
njp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
njp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NEJAP_2385 (lpd)
00020 Citrate cycle (TCA cycle)
NEJAP_2385 (lpd)
00620 Pyruvate metabolism
NEJAP_2385 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
NEJAP_2385 (lpd)
00640 Propanoate metabolism
NEJAP_2385 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NEJAP_2385 (lpd)
00280 Valine, leucine and isoleucine degradation
NEJAP_2385 (lpd)
00310 Lysine degradation
NEJAP_2385 (lpd)
00380 Tryptophan metabolism
NEJAP_2385 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NEJAP_2385 (lpd)
00670 One carbon pool by folate
NEJAP_2385 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
njp04147
]
NEJAP_2385 (lpd)
Enzymes [BR:
njp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NEJAP_2385 (lpd)
Exosome [BR:
njp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NEJAP_2385 (lpd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
AlaDh_PNT_C
FAD_binding_3
DAO
3HCDH_N
NAD_binding_8
Thi4
UDPG_MGDP_dh_N
2-Hacid_dh_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BBB30331
UniProt:
A0A7R6SWD6
LinkDB
All DBs
Position
complement(2637346..2638785)
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AA seq
479 aa
AA seq
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MSQKFDVIVIGAGPGGYVAAIRAAQLGLNTACVEKWVDDKGATLLGGTCLNVGCIPSKAL
LESTHKFHEASHDFDVHGIQTSDVQMDVKKMVSRKDTIVKNLTGGITGLFKANGVTTLSG
MGKLLANKQVEVTAADGSVSVYDAENVILASGSVPVEIPPAPLTEGLILDNAGALDINET
PKRLGVIGAGVIGLEMGSIWARLGSEVTVLEAMDGFLSLADKDVSKEAKKLLGKQGLDIK
LNARCTGTEIIDGKEVKVKYTDANGEQELVVDKLIVAVGRRPQTSGLLAGDSGVKLDERG
FIFVDESCHTGVPGVYAIGDSVRGPMLAHKASEEGVMVADIIAGHKAAMNYDVIPNIIYT
YPELAWVGKTEQELKAEGVKIKVGKFPFAASGRAMASNATDGFVKIIADEETDRILGVHM
VGAIASELIAQGGIAMEFCSSAEDLQLMVFAHPTVSEAVHEAALAVDNHAIHIANRKKR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaatttgatgttatcgtaattggtgccggtcctggtggatatgttgctgcc
attcgtgctgcacagctaggtctgaatactgcgtgcgttgagaagtgggttgatgataaa
ggtgcgactttattaggtggtacttgcttgaatgttggttgtattccttcaaaagcattg
ttggagtctacgcataaattccatgaagcttcacatgacttcgatgttcacggaattcaa
acatctgatgttcaaatggatgttaagaaaatggtatctcgcaaagatactatcgttaaa
aacttaaccggtggtattacggggctgtttaaagccaatggtgtaacaacactttctggt
atgggtaagttgttagctaacaagcaggtagaagtcactgctgctgatggttctgtatct
gtttatgatgctgaaaatgttattttggcatcaggttccgttcctgtagagattccgcca
gcaccacttacggaaggtctgattcttgataatgccggtgcattggatatcaatgaaaca
cctaagcgtttgggtgttattggcgcaggtgttattggtctagaaatgggctcaatctgg
gctcgtcttggttctgaagtgacagtgcttgaagcaatggatgggttcttgtctcttgct
gataaagatgtttctaaagaagctaagaagttgctgggtaaacaaggcttagatattaag
ctgaatgctcgttgtactggcacagagatcattgacggtaaagaagtcaaagttaagtac
acagacgctaacggtgaacaagagcttgttgttgataagttgattgttgcggtaggtcgt
cgtccgcagacttcaggtctactggcgggtgatagcggtgtgaagctggacgagcgtggt
ttcatctttgttgatgaatcttgccatacaggtgtccctggcgtttatgcgataggtgac
tctgtacgtggccctatgctggcacataaagcttctgaagaaggtgttatggttgcagat
atcattgctggtcacaaagcggctatgaactacgatgtgatccctaacattatttacact
taccctgaattagcgtgggttggtaaaacagaacaagaacttaaagccgaaggcgttaaa
attaaggttggtaaattcccatttgcggcttctggtcgtgcaatggcttctaatgcgaca
gatggttttgttaaaatcattgcagatgaagaaactgatcgtattttaggcgttcatatg
gtcggcgcgattgcatctgagcttattgctcagggtggtattgcaatggaattctgctca
agtgcagaagatctacagttaatggtatttgctcacccaaccgtgagtgaagctgtgcat
gaagccgcattggcagtagacaaccatgcaatacatattgctaatcgtaaaaagcgctaa
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