KEGG   Neptunomonas japonica: NEJAP_2385
Entry
NEJAP_2385        CDS       T07060                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
njp  Neptunomonas japonica
Pathway
njp00010  Glycolysis / Gluconeogenesis
njp00020  Citrate cycle (TCA cycle)
njp00260  Glycine, serine and threonine metabolism
njp00280  Valine, leucine and isoleucine degradation
njp00310  Lysine degradation
njp00380  Tryptophan metabolism
njp00620  Pyruvate metabolism
njp00630  Glyoxylate and dicarboxylate metabolism
njp00640  Propanoate metabolism
njp00670  One carbon pool by folate
njp00785  Lipoic acid metabolism
njp01100  Metabolic pathways
njp01110  Biosynthesis of secondary metabolites
njp01120  Microbial metabolism in diverse environments
njp01200  Carbon metabolism
njp01210  2-Oxocarboxylic acid metabolism
njp01240  Biosynthesis of cofactors
Module
njp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
njp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
njp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
njp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
njp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:njp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NEJAP_2385 (lpd)
   00020 Citrate cycle (TCA cycle)
    NEJAP_2385 (lpd)
   00620 Pyruvate metabolism
    NEJAP_2385 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    NEJAP_2385 (lpd)
   00640 Propanoate metabolism
    NEJAP_2385 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NEJAP_2385 (lpd)
   00280 Valine, leucine and isoleucine degradation
    NEJAP_2385 (lpd)
   00310 Lysine degradation
    NEJAP_2385 (lpd)
   00380 Tryptophan metabolism
    NEJAP_2385 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NEJAP_2385 (lpd)
   00670 One carbon pool by folate
    NEJAP_2385 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:njp04147]
    NEJAP_2385 (lpd)
Enzymes [BR:njp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NEJAP_2385 (lpd)
Exosome [BR:njp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NEJAP_2385 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored HI0933_like AlaDh_PNT_C FAD_binding_3 DAO 3HCDH_N NAD_binding_8 Thi4 UDPG_MGDP_dh_N 2-Hacid_dh_C Lycopene_cycl
Other DBs
NCBI-ProteinID: BBB30331
UniProt: A0A7R6SWD6
LinkDB
Position
complement(2637346..2638785)
AA seq 479 aa
MSQKFDVIVIGAGPGGYVAAIRAAQLGLNTACVEKWVDDKGATLLGGTCLNVGCIPSKAL
LESTHKFHEASHDFDVHGIQTSDVQMDVKKMVSRKDTIVKNLTGGITGLFKANGVTTLSG
MGKLLANKQVEVTAADGSVSVYDAENVILASGSVPVEIPPAPLTEGLILDNAGALDINET
PKRLGVIGAGVIGLEMGSIWARLGSEVTVLEAMDGFLSLADKDVSKEAKKLLGKQGLDIK
LNARCTGTEIIDGKEVKVKYTDANGEQELVVDKLIVAVGRRPQTSGLLAGDSGVKLDERG
FIFVDESCHTGVPGVYAIGDSVRGPMLAHKASEEGVMVADIIAGHKAAMNYDVIPNIIYT
YPELAWVGKTEQELKAEGVKIKVGKFPFAASGRAMASNATDGFVKIIADEETDRILGVHM
VGAIASELIAQGGIAMEFCSSAEDLQLMVFAHPTVSEAVHEAALAVDNHAIHIANRKKR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtcacaaaaatttgatgttatcgtaattggtgccggtcctggtggatatgttgctgcc
attcgtgctgcacagctaggtctgaatactgcgtgcgttgagaagtgggttgatgataaa
ggtgcgactttattaggtggtacttgcttgaatgttggttgtattccttcaaaagcattg
ttggagtctacgcataaattccatgaagcttcacatgacttcgatgttcacggaattcaa
acatctgatgttcaaatggatgttaagaaaatggtatctcgcaaagatactatcgttaaa
aacttaaccggtggtattacggggctgtttaaagccaatggtgtaacaacactttctggt
atgggtaagttgttagctaacaagcaggtagaagtcactgctgctgatggttctgtatct
gtttatgatgctgaaaatgttattttggcatcaggttccgttcctgtagagattccgcca
gcaccacttacggaaggtctgattcttgataatgccggtgcattggatatcaatgaaaca
cctaagcgtttgggtgttattggcgcaggtgttattggtctagaaatgggctcaatctgg
gctcgtcttggttctgaagtgacagtgcttgaagcaatggatgggttcttgtctcttgct
gataaagatgtttctaaagaagctaagaagttgctgggtaaacaaggcttagatattaag
ctgaatgctcgttgtactggcacagagatcattgacggtaaagaagtcaaagttaagtac
acagacgctaacggtgaacaagagcttgttgttgataagttgattgttgcggtaggtcgt
cgtccgcagacttcaggtctactggcgggtgatagcggtgtgaagctggacgagcgtggt
ttcatctttgttgatgaatcttgccatacaggtgtccctggcgtttatgcgataggtgac
tctgtacgtggccctatgctggcacataaagcttctgaagaaggtgttatggttgcagat
atcattgctggtcacaaagcggctatgaactacgatgtgatccctaacattatttacact
taccctgaattagcgtgggttggtaaaacagaacaagaacttaaagccgaaggcgttaaa
attaaggttggtaaattcccatttgcggcttctggtcgtgcaatggcttctaatgcgaca
gatggttttgttaaaatcattgcagatgaagaaactgatcgtattttaggcgttcatatg
gtcggcgcgattgcatctgagcttattgctcagggtggtattgcaatggaattctgctca
agtgcagaagatctacagttaatggtatttgctcacccaaccgtgagtgaagctgtgcat
gaagccgcattggcagtagacaaccatgcaatacatattgctaatcgtaaaaagcgctaa

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