Neptunomonas japonica: NEJAP_2561
Help
Entry
NEJAP_2561 CDS
T07060
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
njp
Neptunomonas japonica
Pathway
njp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NEJAP_2561 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_2561 (uvrB)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NEJAP_2561 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NEJAP_2561 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HEM4
Kinesin
Motif
Other DBs
NCBI-ProteinID:
BBB30506
UniProt:
A0A7R6PLP7
LinkDB
All DBs
Position
complement(2832993..2835008)
Genome browser
AA seq
671 aa
AA seq
DB search
MKERFKVNSPFSPAGDQPEAIKGLVQGINDGLAAQTLLGVTGSGKTFTIANVVSEVQRPT
IVLAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIDKDASINEHIE
QMRLSATKALLERSDVIIVATVSSIYGLGDPESYLSMMLHLDRGDVADQRKILRRLAELQ
YKRNDVELHRGTYRVRGDVIDVFPAESERDALRIELFDDEVENLSYFDPLTGEVLRKVPR
ATVYPKSHYVTPREILVEAVEKIKVELHERLTFLKEIDKLVELQRLEQRTMYDMEMIMEL
GYCSGIENYSRYLSGREPGGAPPTLFDYLPDNALVVIDESHVTIPQLGAMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEWESLAPQMIFVSATPSRYEAANAGQIVEQVVRPTGLIDP
VVEIRPASTQVDDLLEEINKVVVDNCRVIVTVLTKRMAEDLTEYLAEHGVRVRYVHSDID
TVERVEIIRDLRIGEFDVLVGINLLREGIDMPEVGLVTILDADKEGFLRSDTALIQTIGR
AARNINGRAILYADRITGSMERAIAETDRRREKQVAHNERHGITPKGITKSVADIMEGAS
TIPGRKAARTAKKVADKAGDFEFDPSTMTTKQLVKAMSQLEDKMYEASKNLEFELAGHYR
DQLEQLKHAAI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgtttcaaagttaactcacctttttcacccgctggcgatcagccagaagcc
attaaagggcttgtacaagggatcaatgacggattggctgcacaaaccctgttaggtgtg
actggttctggtaagacatttacgatcgccaatgtagtttcagaagtgcagcgacctaca
attgttttagcgcacaataaaacattggcggcacagttatacggtgagtttaaagagttc
tttcctgataatgccgtagagtattttgtatcttactacgactactatcagccagaggcc
tatgtcccttcttcagatacatttatagataaagatgcatcgattaacgagcatattgag
cagatgcgcttgtcagctactaaggcgctgctggagcgtagcgatgttattatcgtagca
acggtatcttctatttatggtctgggtgatcccgaatcatatttatcgatgatgttgcat
ctagatcgcggtgatgtggctgatcagcgtaagattttgcgtcgcttagctgagctgcaa
tacaagcgcaatgatgtggaattacaccgtgggacatatcgcgtacgtggtgatgttatt
gacgtttttcctgcagagtcggaaagagacgcgctacgtattgagctgtttgatgatgaa
gttgagaacttaagctacttcgaccctttaacaggagaagtgctgcgtaaggttccacgc
gccacggtttatcctaaatcgcattacgttacgccgcgtgaaatcttagtagaagcggtt
gaaaaaataaaagttgagctgcatgagcgcctcacgtttttaaaagagatcgataaattg
gttgagctgcagcgcttagagcagcgcaccatgtacgatatggaaatgatcatggagctt
ggctactgctcaggcattgaaaactattcgcggtatttatcgggacgtgagccaggtgga
gcgccacctactctgtttgattatctgcctgataatgcgctggtggttattgatgagtca
catgtcactattccacagcttggagcgatgtataaaggtgaccgctcacgtaaagagact
ctcgtggaatatggatttcgtttaccttctgcattagataaccgtcctctacgctttgaa
gagtgggaaagcctagcaccgcaaatgatttttgtttctgctactccaagtagatatgaa
gcggcaaatgctgggcaaattgtcgagcaagtggtacgcccaacaggcttaatagacccc
gttgttgagatacgtcctgcctctactcaggtcgatgatctgttagaagagataaacaag
gttgttgtcgataactgcagagttattgtgaccgtattaactaaacgcatggcagaagac
ttaacagagtatctagcagaacatggtgttagggtgcgttatgtacattcagatatagat
accgttgagcgtgtagagattattcgtgatttgcgtatcggtgaatttgatgtgttggta
ggtattaacttattaagggaagggattgatatgcccgaggttgggctggtgacgattctt
gatgctgataaagaaggcttcttgcgttcagatactgctttgattcagaccatagggcga
gcagcccgtaacattaatggacgtgcaatcctttacgctgatcgaattacaggctcgatg
gaacgcgctattgcagagacggacaggcgccgtgagaagcaagtcgcacataatgagcga
catgggattacacccaaagggattactaaatctgttgcagatattatggaaggtgcttct
accattccaggccgaaaagcggcgcgtacggcgaagaaagtggcagataaggccggtgat
tttgagtttgatccaagcacaatgactaccaagcagctggttaaagcgatgagtcaacta
gaggataaaatgtatgaagcatctaaaaatcttgaatttgaactggccggtcattacaga
gatcagctagagcaattaaaacatgccgctatttga
DBGET
integrated database retrieval system
