Neptunomonas japonica: NEJAP_2774
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Entry
NEJAP_2774 CDS
T07060
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
njp
Neptunomonas japonica
Pathway
njp02020
Two-component system
njp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NEJAP_2774 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NEJAP_2774 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
njp03021
]
NEJAP_2774 (rpoN)
Transcription machinery [BR:
njp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NEJAP_2774 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
KIF21A_2nd
HTH_21
Motif
Other DBs
NCBI-ProteinID:
BBB30717
UniProt:
A0A7R6PQF7
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All DBs
Position
3064452..3065951
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AA seq
499 aa
AA seq
DB search
MKQSLQLKMGQHLTMTPQLQQAIRLLQLSTLDLQHEIQEALDSNPMLETSDDFDETHQPE
VQQEITTPSEDNNLAQSSTSSNESIENSAEDQWSDNIPSELSTDSSWEDTYQTGTSSSQR
DDDSFFESNDTAEETLQDHLNWQLNLTPMSPADRLIAEAIIDGIDNEGYLRSSTEEILEH
FKESEPTLFAESELDEVDAVLHRIQQFDPPGVASRDLGECLSIQLRQLPPDTPLLQQALT
LCKQYIHLLGTRDYKQLLRKLRLKEPQLQAIILLIQSLNPYPGSHISSSKAEYVTPDVYV
EKFQGVWTVRLNQDASPNLKINTSYADLIRRADSSADNTYLKNHLQEARWFIKSLQSRNE
TLLKVSSQIIERQSAFLEHGDEAMKPMVLHDIAEAVEMHESTISRVTTQKYMHTPRGIFE
LKYFFSSHVSTNDGGAASSTAIRAVIKKMISAENTAKPLSDNKIAQLLDQEGIKVARRTV
AKYREAMGIAPSNERKCLV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcattgcaactcaaaatgggtcagcacctgacaatgacccctcaactacaa
caagctattcgtttgttgcagctgtcgacactcgacctccaacatgaaatacaggaggca
ctggacagtaacccgatgctcgaaacgagtgatgatttcgatgaaacgcatcaacccgaa
gtacagcaagaaataaccactccaagtgaagataacaacctcgcccaatccagcacatca
agcaacgagagcatagagaactcagctgaagatcagtggagcgacaacattccctctgaa
ctcagcacagactcctcttgggaagacacgtatcaaacaggaacaagcagtagccagcga
gatgatgattctttttttgaatctaacgacacggcagaagaaacactgcaagaccacctt
aactggcagttaaatttaacgccaatgagcccggcagaccgcttaattgctgaagcaatt
attgacggcatcgataacgaagggtatttgcgctcctctacagaagaaattcttgaacac
tttaaagagagcgaacctacattatttgccgagtctgaactcgatgaagtagacgcagta
ttacacaggattcaacagtttgaccctccaggcgttgcctctcgtgatttgggtgagtgc
ttaagcattcagttgcgccaattaccaccagacacgccgctgcttcaacaagcgcttaca
ttatgcaaacaatacatacacttgttaggaacacgggattataagcagctactacgaaaa
ctgcgattaaaagagcctcaactacaagctattattctcttaatacaatcactaaacccc
tatcccggttctcatatttctagctcaaaagctgaatacgttacccccgatgtatatgta
gagaaattccaaggggtttggacggtacgactaaatcaagacgcatctcccaacctaaaa
attaacacgagttatgccgacctcattcgtcgagctgacagcagcgctgataacacctat
cttaaaaaccacttacaagaagctcgctggtttataaaaagcctacaaagccgtaatgag
actctactaaaagtatctagtcagattattgagcgccaatcagcgttcttggagcatggt
gatgaagccatgaagccaatggtgttacatgacattgcagaagcagtagaaatgcatgaa
tcgactatttctcgtgttaccacacaaaaatatatgcacactccgcgcggaatttttgag
ttaaaatattttttttctagtcatgtaagcaccaatgacggtggcgctgcgtcctctaca
gctattcgcgccgtcattaaaaaaatgatttctgctgaaaatactgcaaagccgttgagt
gataacaaaattgcccaactgttagaccaagaaggaattaaagttgcaagaaggactgtt
gcaaaataccgagaagcaatgggcattgctccttctaatgaaaggaagtgtctggtttaa
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