KEGG   Neptunomonas japonica: NEJAP_3053
Entry
NEJAP_3053        CDS       T07060                                 
Symbol
hfq
Name
(GenBank) host factor-I protein
  KO
K03666  host factor-I protein
Organism
njp  Neptunomonas japonica
Pathway
njp02024  Quorum sensing
njp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:njp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NEJAP_3053 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NEJAP_3053 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:njp03019]
    NEJAP_3053 (hfq)
   03036 Chromosome and associated proteins [BR:njp03036]
    NEJAP_3053 (hfq)
Messenger RNA biogenesis [BR:njp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NEJAP_3053 (hfq)
Chromosome and associated proteins [BR:njp03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    NEJAP_3053 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: BBB30992
UniProt: A0A7R6SXT6
LinkDB
Position
complement(3357814..3358053)
AA seq 79 aa
MSKGQSLQDPYLNVLRKERVPVSIFLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVKLPQPDEVQPD
NT seq 240 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcagtctctacaagacccttatctgaacgttctacgcaaggaacgtgtt
cccgtttcaattttcttggtaaacggtattaagctgcaggggcagattgaatctttcgat
caatttgttattttgcttaaaaatacggtaagccagatggtgtataaacacgccatttct
acggttgtcccatcacgcccggtgaaattgccacagcctgatgaagtacaacccgactga

DBGET integrated database retrieval system