Neptunomonas japonica: NEJAP_3300
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Entry
NEJAP_3300 CDS
T07060
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
njp
Neptunomonas japonica
Pathway
njp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEJAP_3300 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_3300 (mutM)
Enzymes [BR:
njp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NEJAP_3300 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NEJAP_3300 (mutM)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEJAP_3300 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBB31238
UniProt:
A0A7R6PKF6
LinkDB
All DBs
Position
complement(3640432..3641244)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRSGIEPHILNQEIAGVVVRQPQLRWRVPELELRKLEGLSIKSVVRRGKYI
LLETERGAVVIHLGMSGSLRIISDERSALKHDHVDIQFSDGILLRYTDPRRFGAILWQPK
GQVHERIASLGPEPLSDQFNGRYLHQQCKGRSVTIKQFIMNSKVVVGVGNIYANEALFHA
GIDPRKSAGQISEKRLSVLVKRIKSVLTAAIFQGGTTLKDFVDSDGQPGYFQQSLNVYGR
GGEPCSTCSRTLKEVRLGQRSTVFCNYCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaattgcctgaagttgaaacgaccagaagcggaatcgagccgcatatactgaat
caagaaattgctggtgtggttgtgaggcaaccgcaattgcgctggagagttcctgaactt
gagttacgtaagcttgaaggcttatctataaagagtgtggtgcgacgcggtaagtatatt
cttttagagaccgagcgtggtgcggttgttattcatttggggatgtcgggcagtttgcgg
attatctctgatgagcgatctgccttgaagcatgaccatgtcgatatccaatttagcgac
gggatcttgctgcgttacacggacccacgtcgtttcggtgccattttatggcaacccaaa
gggcaagtacatgagcgtattgcctctttggggcctgagcccctatcggatcaatttaat
gggcgatatttgcatcagcaatgtaaggggcgatctgttactattaagcaattcatcatg
aatagcaaagtggttgttggtgtagggaatatttatgccaatgaagcactgttccacgca
ggtattgatccccggaaatctgcgggtcaaatctctgagaagcgcttatcggtgctcgtg
aagagaatcaaaagtgtgctgactgcagcgatttttcaaggcggcacaactcttaaagat
tttgtcgatagtgatggtcagcctggatattttcagcagtctttgaatgtttatgggaga
ggtggtgagccttgttccacttgtagtcgcaccttgaaagaagtgcgtttagggcagcgt
agtacggtgttctgcaattattgtcagcggtag
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